RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PTGFRP43088 359 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 RAB7AP51149 207 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 BLVRAP53004 296 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 ZNF91Q05481 1191 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 AESQ08117 197 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 TSPAN31Q12999 210 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 KLF10Q13118 480 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 MADCAM1Q13477 382 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 C17orf58Q2M2W7 97 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 CLVS2Q5SYC1 327 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 LCN1P1Q5VSP4 162 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 SHFQ7M4L6 423 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 PGAM4Q8N0Y7 254 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 OR52L1Q8NGH7 329 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 OR4D6Q8NGJ1 314 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 THEM6Q8WUY1 208 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 S1PR3Q99500 378 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 CHCHD6Q9BRQ6 235 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 THAP7Q9BT49 309 aaPredicted RBP7□□□□□ -1.29
SSBP1-212ENST00000489378 TOLLIPQ9H0E2 274 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 ZNF446Q9NWS9 450 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 FAM206AQ9NX38 181 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 STUB1Q9UNE7 303 aa7□□□□□ -1.29
SSBP1-212ENST00000489378 AMMECR1Q9Y4X0 333 aaPredicted RBP7□□□□□ -1.29
SSBP1-212ENST00000489378 IGKV1-27A0A075B6S5 117 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 SIRPB1O00241 398 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 MPZL2O60487 215 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 LYNP07948 512 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 OR5H8P0DN80 308 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 CALCBP10092 127 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 NCK1P16333 377 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 REG1BP48304 166 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 RAB9AP51151 201 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 SNU13P55769 128 aaKnown RBP6.99□□□□□ -1.29
SSBP1-212ENST00000489378 MAGOHP61326 146 aaKnown RBP6.99□□□□□ -1.29
SSBP1-212ENST00000489378 LIPEQ05469 1076 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 CEMP1Q6PRD7 247 aaPredicted RBP6.99□□□□□ -1.29
SSBP1-212ENST00000489378 MOB3BQ86TA1 216 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 IQCF2Q8IXL9 164 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 OTOSQ8NHW6 89 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 GNPDA2Q8TDQ7 276 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 EMG1Q92979 244 aaKnown RBP6.99□□□□□ -1.29
SSBP1-212ENST00000489378 KIRREL1Q96J84 757 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 MNTQ99583 582 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 RASL11BQ9BPW5 248 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 PBOV1Q9GZY1 135 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 SEBOXQ9HB31 216 aaPredicted RBP6.99□□□□□ -1.29
SSBP1-212ENST00000489378 ING3Q9NXR8 418 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 ZNF580Q9UK33 172 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 PSG11Q9UQ72 335 aa6.99□□□□□ -1.29
SSBP1-212ENST00000489378 FAM230AA0A1W2PPH8 454 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 ODAMA1E959 279 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 DLGAP1O14490 977 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 GSTA4O15217 222 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 SELENOFO60613 162 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 DHRS3O75911 302 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 GADD45GO95257 159 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 NPPAP01160 153 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 SOX6P35712 828 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 NUDT2P50583 147 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 EWSR1Q01844 656 aaKnown RBP eCLIP6.98□□□□□ -1.29
SSBP1-212ENST00000489378 COQ5Q5HYK3 327 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 LGALS9CQ6DKI2 356 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 SLC25A26Q70HW3 274 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 IZUMO1Q8IYV9 350 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 OR2T10Q8NGZ9 312 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 FAM162AQ96A26 154 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 PLEKHA3Q9HB20 300 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 RBFOX1Q9NWB1 397 aaKnown RBP6.98□□□□□ -1.29
SSBP1-212ENST00000489378 GLS2Q9UI32 602 aa6.98□□□□□ -1.29
SSBP1-212ENST00000489378 IGHV1-3A0A0C4DH29 117 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 A0A1B0GVY2 172 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 TMEM269A0A1B0GVZ9 245 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 A0A1W2PPE3 182 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 FAM90A10PA6NDY2 464 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 ZNF736B4DX44 427 aaPredicted RBP6.97□□□□□ -1.29
SSBP1-212ENST00000489378 HSD17B6O14756 317 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 ENTPD6O75354 484 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 B3GALNT1O75752 331 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 LGALS1P09382 135 aaKnown RBP6.97□□□□□ -1.29
SSBP1-212ENST00000489378 NPBWR2P48146 333 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 GNG10P50151 68 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 F2RL1P55085 397 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 MFGE8Q08431 387 aaPredicted RBP6.97□□□□□ -1.29
SSBP1-212ENST00000489378 RPL13AP3Q6NVV1 102 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 GTSCR1Q86UQ5 136 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 SLC15A3Q8IY34 581 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 ENTHD1Q8IYW4 607 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 HAVCR2Q8TDQ0 301 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 CASTOR1Q8WTX7 329 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 STON2Q8WXE9 905 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 COQ2Q96H96 371 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 FAM210AQ96ND0 272 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 ELOVL1Q9BW60 279 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 TSSK6Q9BXA6 273 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 CCDC134Q9H6E4 229 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 CHCHD3Q9NX63 227 aaKnown RBP6.97□□□□□ -1.29
SSBP1-212ENST00000489378 IL20Q9NYY1 176 aa6.97□□□□□ -1.29
SSBP1-212ENST00000489378 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.97□□□□□ -1.29
SSBP1-212ENST00000489378 PKD1P98161 4303 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms