RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 RHOFQ9HBH0 211 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 KIF25Q9UIL4 384 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 ZNF281Q9Y2X9 895 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 TRAV8-7A0A075B6U6 113 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 MEIKINA0A087WXM9 373 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 FUOMA2VDF0 154 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 CSN2P05814 226 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 SERPINA2P20848 420 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 HTR1DP28221 377 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 RPS11P62280 158 aaKnown RBP eCLIP11.27□□□□□ -0.61
VTI1A-206ENST00000489142 DEFA6Q01524 100 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 RBM39Q14498 530 aaKnown RBP11.27□□□□□ -0.61
VTI1A-206ENST00000489142 HERPUD1Q15011 391 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 LTC4SQ16873 150 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 DMKNQ6E0U4 476 aaPredicted RBP11.27□□□□□ -0.61
VTI1A-206ENST00000489142 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 C8orf59Q8N0T1 100 aaPredicted RBP11.27□□□□□ -0.61
VTI1A-206ENST00000489142 OR52N1Q8NH53 320 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 PLPPR1Q8TBJ4 325 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 CPNE2Q96FN4 548 aaPredicted RBP11.27□□□□□ -0.61
VTI1A-206ENST00000489142 PGLYRP3Q96LB9 341 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 CDCA4Q9BXL8 241 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 RANBP3Q9H6Z4 567 aaPredicted RBP11.27□□□□□ -0.61
VTI1A-206ENST00000489142 C8orf4Q9NR00 106 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 CHCHD3Q9NX63 227 aaKnown RBP11.27□□□□□ -0.61
VTI1A-206ENST00000489142 TAS2R3Q9NYW6 316 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
VTI1A-206ENST00000489142 TRBV5-5A0A0J9YX44 114 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 A0A1W2PP11 408 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 C21orf33P30042 268 aaPredicted RBP11.26□□□□□ -0.61
VTI1A-206ENST00000489142 BDKRB2P30411 391 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 ZNF93P35789 620 aaPredicted RBP11.26□□□□□ -0.61
VTI1A-206ENST00000489142 BLCAPP62952 87 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 RIPK1Q13546 671 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 C2orf68Q2NKX9 166 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 OR52W1Q6IF63 320 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 Q6ZTK2 550 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 C1QL4Q86Z23 238 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 ZNF485Q8NCK3 441 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 BPIFB6Q8NFQ5 453 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 OR4D6Q8NGJ1 314 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 OR51T1Q8NGJ9 327 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 OR14A2Q96R54 314 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 ZNF184Q99676 751 aaPredicted RBP11.26□□□□□ -0.61
VTI1A-206ENST00000489142 TMEM138Q9NPI0 162 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 SERTAD4Q9NUC0 356 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 ST3GAL6Q9Y274 331 aa11.26□□□□□ -0.61
VTI1A-206ENST00000489142 ZNF729A6NN14 1252 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 GEMIN2O14893 280 aaKnown RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 CASQ2O14958 399 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 IGLV1-47P01700 117 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 ALDOBP05062 364 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 CSF1P09603 554 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 IGFBP3P17936 291 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 RBM11P57052 281 aaKnown RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 MED21Q13503 144 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 IL13RA2Q14627 380 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 SLC22A6Q4U2R8 563 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 RSBN1Q5VWQ0 802 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 ASCL4Q6XD76 172 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 RTN4RL2Q86UN3 420 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 STX19Q8N4C7 294 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 SUMF2Q8NBJ7 301 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 RFESDQ8TAC1 157 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 MRGPRDQ8TDS7 321 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 DPCDQ9BVM2 203 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 METTL9Q9H1A3 318 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 CALYQ9NYX4 217 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 OR6C3Q9NZP0 311 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 DPM3Q9P2X0 92 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 NKX1-2Q9UD57 310 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-206ENST00000489142 PSORS1C1Q9UIG5 152 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 NOTCH1P46531 2555 aa11.25□□□□□ -0.61
VTI1A-206ENST00000489142 KBTBD11-OT1A0A1B0GTJ5 212 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 EFCAB10A6NFE3 127 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 SH2D7A6NKC9 451 aaPredicted RBP11.24□□□□□ -0.61
VTI1A-206ENST00000489142 TOR1AO14656 332 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 MYL12BO14950 172 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 OR7C1O76099 320 aaPredicted RBP11.24□□□□□ -0.61
VTI1A-206ENST00000489142 CSTBP04080 98 aaKnown RBP11.24□□□□□ -0.61
VTI1A-206ENST00000489142 MAS1P04201 325 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 CD28P10747 220 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 SSTR5P35346 364 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 GNG10P50151 68 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 DYNLT3P51808 116 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 BDH1Q02338 343 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 HLA-DRB5Q30154 266 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 Q499Y3 187 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 YIF1BQ5BJH7 314 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 OSR2Q8N2R0 312 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 ZNF596Q8TC21 504 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 MUL1Q969V5 352 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 KIRREL1Q96J84 757 aa11.24□□□□□ -0.61
VTI1A-206ENST00000489142 CYYR1Q96J86 154 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms