RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 KIAA0141Q14154 515 aaPredicted RBP12.56□□□□□ -0.4
USP48-210ENST00000489108 ATXN7L3Q14CW9 347 aaPredicted RBP12.56□□□□□ -0.4
USP48-210ENST00000489108 Q6P435 159 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 SLC35F2Q8IXU6 374 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 Q8N6K4 173 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 DNAAF1Q8NEP3 725 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 OR5B12Q96R08 314 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 CNN2Q99439 309 aaKnown RBP12.56□□□□□ -0.4
USP48-210ENST00000489108 KLK15Q9H2R5 256 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 PLSCR3Q9NRY6 295 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 IDI2-AS1Q9NZ38 188 aa12.56□□□□□ -0.4
USP48-210ENST00000489108 IGHV1-3A0A0C4DH29 117 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 IGKV1-9A0A0C4DH69 117 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 SLC33A1O00400 549 aaPredicted RBP12.55□□□□□ -0.4
USP48-210ENST00000489108 OVOL1O14753 267 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 VDAC1P21796 283 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 REG1BP48304 166 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 GNB1P62873 340 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 SRSF7Q16629 238 aaKnown RBP eCLIP12.55□□□□□ -0.4
USP48-210ENST00000489108 BCDIN3DQ7Z5W3 292 aaKnown RBP12.55□□□□□ -0.4
USP48-210ENST00000489108 CATSPERDQ86XM0 798 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 DEFB107AQ8IZN7 70 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 ZNF565Q8N9K5 539 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 OR13A1Q8NGR1 328 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 OR10X1Q8NGY0 326 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 RFESDQ8TAC1 157 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 MYOZ3Q8TDC0 251 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 RFT1Q96AA3 541 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 KCTD7Q96MP8 289 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 ADI1Q9BV57 179 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 OSBPL10Q9BXB5 764 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 COMMD4Q9H0A8 199 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 CALYQ9NYX4 217 aa12.55□□□□□ -0.4
USP48-210ENST00000489108 ZNF670-ZNF695F2Z2N8 137 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 GAPDHP04406 335 aaKnown RBP12.54□□□□□ -0.4
USP48-210ENST00000489108 GLP1RP43220 463 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 ZNF816Q0VGE8 651 aaPredicted RBP12.54□□□□□ -0.4
USP48-210ENST00000489108 FAM98BQ52LJ0 330 aaKnown RBP12.54□□□□□ -0.4
USP48-210ENST00000489108 YIPF7Q8N8F6 280 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 ZNF491Q8N8L2 437 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 OR2T10Q8NGZ9 312 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
USP48-210ENST00000489108 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 S1PR3Q99500 378 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 RASL11BQ9BPW5 248 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 ELAC2Q9BQ52 826 aaKnown RBP12.54□□□□□ -0.4
USP48-210ENST00000489108 TEX12Q9BXU0 123 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 SLC25A19Q9HC21 320 aa12.54□□□□□ -0.4
USP48-210ENST00000489108 HSD17B6O14756 317 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 DEGS1O15121 323 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 KDM4BO94953 1096 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 CST1P01037 141 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 IGHV4-30-4P0DP06 118 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 ATF1P18846 271 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 PRKACGP22612 351 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 HTR1FP30939 366 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 RUNX1Q01196 453 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 GABPB1Q06547 395 aaPredicted RBP12.53□□□□□ -0.4
USP48-210ENST00000489108 GK3PQ14409 553 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 SPATS1Q496A3 300 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 SSX6Q7RTT6 188 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 IZUMO1Q8IYV9 350 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 HS3ST5Q8IZT8 346 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 RDH10Q8IZV5 341 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 CHST4Q8NCG5 386 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
USP48-210ENST00000489108 ADAT3Q96EY9 351 aaPredicted RBP12.53□□□□□ -0.4
USP48-210ENST00000489108 MNTQ99583 582 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 ZNF556Q9HAH1 456 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 ADGRL4Q9HBW9 690 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 CLN6Q9NWW5 311 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 KIF25Q9UIL4 384 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 VSIG4Q9Y279 399 aa12.53□□□□□ -0.4
USP48-210ENST00000489108 MEIKINA0A087WXM9 373 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 NPIPB11E5RHQ5 1161 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 HSPB6O14558 160 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 PRKYO43930 277 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 IL1AP01583 271 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 PRKACBP22694 351 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 C21orf33P30042 268 aaPredicted RBP12.52□□□□□ -0.41
USP48-210ENST00000489108 F2RL1P55085 397 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 TMEM65Q6PI78 240 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 LHFPL2Q6ZUX7 228 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 Q8N1Y9 231 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 FAM71E2Q8N5Q1 922 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 CCDC54Q8NEL0 328 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 OR6Q1Q8NGQ2 317 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 PP6455Q8WZ26 134 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 C10orf35Q96D05 121 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 TBX5Q99593 518 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 KRT84Q9NSB2 600 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 C19orf73Q9NVV2 129 aa12.52□□□□□ -0.41
USP48-210ENST00000489108 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 ZNF736B4DX44 427 aaPredicted RBP12.51□□□□□ -0.41
USP48-210ENST00000489108 IGF1P05019 195 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 KRT8P05787 483 aa12.51□□□□□ -0.41
USP48-210ENST00000489108 MYF6P23409 242 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms