RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 IGHV1-45A0A0A0MS14 117 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 A0A1B0GTI1 187 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 M0QXV9 152 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 MYO1DO94832 1006 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 OPN1SWP03999 348 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 PLXNA3P51805 1871 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 HNRNPA1L2Q32P51 320 aaKnown RBP1.19□□□□□ -2.22
PTPN4-212ENST00000488896 ACTL10Q5JWF8 245 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 SLC25A25Q6KCM7 469 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 NOXRED1Q6NXP6 359 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 TCF23Q7RTU1 214 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 PID1Q7Z2X4 250 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 SYS1Q8N2H4 156 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 ASCC1Q8N9N2 400 aaKnown RBP1.19□□□□□ -2.22
PTPN4-212ENST00000488896 OR6N2Q8NGY6 317 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 ZNF396Q96N95 335 aaPredicted RBP1.19□□□□□ -2.22
PTPN4-212ENST00000488896 TTTY12Q9BZ98 90 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 SLC25A31Q9H0C2 315 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 VAPAQ9P0L0 249 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 CYB5R1Q9UHQ9 305 aa1.19□□□□□ -2.22
PTPN4-212ENST00000488896 ZNF638Q14966 1978 aaKnown RBP1.19□□□□□ -2.22
PTPN4-212ENST00000488896 TRAV8-3A0A0A6YYJ7 113 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 A0A0J9YYE9 177 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 OR5H14A6NHG9 310 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 H0YC42 278 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 S1PR2O95136 353 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 VAPBO95292 243 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 OTCP00480 354 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 TRBC1P01850 177 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 GCLMP48507 274 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 PLTPP55058 493 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 STX4Q12846 297 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 PRDX4Q13162 271 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 NXNL2Q5VZ03 156 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 FAHD1Q6P587 224 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 BIRC8Q96P09 236 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 OLFM3Q96PB7 478 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 B9D2Q9BPU9 175 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 SYT4Q9H2B2 425 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 MPDZO75970 2070 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 GBF1Q92538 1859 aa1.18□□□□□ -2.22
PTPN4-212ENST00000488896 TRPM3Q9HCF6 1732 aaPredicted RBP1.18□□□□□ -2.22
PTPN4-212ENST00000488896 TRBV24-1A0A075B6N3 115 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 GSTTP1A0A1W2PQM5 241 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 IGKV2-29A2NJV5 120 aaPredicted RBP1.17□□□□□ -2.22
PTPN4-212ENST00000488896 PGPA6NDG6 321 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 LECT2O14960 151 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 SH2D1AO60880 128 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 GPR75O95800 540 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 BGNP21810 368 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 ELK4P28324 431 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 EVI2BP34910 448 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 PSG4Q00888 419 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 C2orf80Q0P641 193 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 STK38Q15208 465 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 Q6ZRU5 148 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 SCXQ7RTU7 201 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 FAM58AQ8N1B3 248 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 ZIC4Q8N9L1 334 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 GATD1Q8NB37 220 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 OR6K2Q8NGY2 324 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 OR4A5Q8NH83 315 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 OR2V1Q8NHB1 315 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 CDKL2Q92772 493 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 REEP6Q96HR9 211 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 VCX3AQ9NNX9 186 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 RMND1Q9NWS8 449 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 SLC23A2Q9UGH3 650 aa1.17□□□□□ -2.22
PTPN4-212ENST00000488896 POLR3AO14802 1390 aaPredicted RBP1.17□□□□□ -2.22
PTPN4-212ENST00000488896 ATRNO75882 1429 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 ZNF860A6NHJ4 632 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 C17orf98A8MV24 154 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 TCF21O43680 179 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 POP7O75817 140 aaKnown RBP1.16□□□□□ -2.22
PTPN4-212ENST00000488896 CA2P00918 260 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 CSTAP01040 98 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 OR12D1P0DN82 309 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 PTNP21246 168 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 DEKP35659 375 aaKnown RBP1.16□□□□□ -2.22
PTPN4-212ENST00000488896 TTPAP49638 278 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 RAB38P57729 211 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 RAB25P57735 213 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 TNXAQ16473 311 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 PYCR3Q53H96 274 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 C10orf91Q5T1B1 145 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 C10orf107Q8IVU9 208 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 OR11G2Q8NGC1 345 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 OR5C1Q8NGR4 320 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 OR2AE1Q8NHA4 323 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 MFSD8Q8NHS3 518 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 MITD1Q8WV92 249 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 NELFBQ8WX92 580 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 CMBLQ96DG6 245 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 CPB2Q96IY4 423 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 COPS4Q9BT78 406 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 ARL6Q9H0F7 186 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 BTRCQ9Y297 605 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 LINC00588Q9Y4M8 146 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 URGCP-MRPS24S4R325 110 aa1.16□□□□□ -2.22
PTPN4-212ENST00000488896 IGHV2-26A0A0B4J1V2 119 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms