RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 CALRP27797 417 aaKnown RBP12.31□□□□□ -0.44
CXCL12-207ENST00000488591 PSMB9P28065 219 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 GLIPR1P48060 266 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 PSMD7P51665 324 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 DLX6P56179 175 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 LGALS4P56470 323 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 UBA52P62987 128 aaKnown RBP12.31□□□□□ -0.44
CXCL12-207ENST00000488591 SSX1Q16384 188 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 MIDNQ504T8 468 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 C1orf100Q5SVJ3 147 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 ATAD3CQ5T2N8 411 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 ZNF565Q8N9K5 539 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 OR13D1Q8NGV5 346 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 CORO2AQ92828 525 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 DPCDQ9BVM2 203 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-207ENST00000488591 SPACA1Q9HBV2 294 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 ESM1Q9NQ30 184 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 TAS2R3Q9NYW6 316 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 OR6C3Q9NZP0 311 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 COL6A5A8TX70 2615 aa12.31□□□□□ -0.44
CXCL12-207ENST00000488591 A0A1W2PP11 408 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 CLDN34H7C241 214 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 MGMTP16455 207 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 COX7A1P24310 79 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 HTR2CP28335 458 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 SLC9A3R2Q15599 337 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 TAF9Q16594 264 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 OR52W1Q6IF63 320 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 HCP5Q6MZN7 132 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 ZNF782Q6ZMW2 699 aaPredicted RBP12.3□□□□□ -0.44
CXCL12-207ENST00000488591 PNKDQ8N490 385 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 SUMF2Q8NBJ7 301 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 COQ2Q96H96 371 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 SELENOIQ9C0D9 397 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 NCOR1P1Q9H4R4 102 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 BANF2Q9H503 90 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 PLGRKTQ9HBL7 147 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 SESN1Q9Y6P5 492 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 DSCAML1Q8TD84 2053 aa12.3□□□□□ -0.44
CXCL12-207ENST00000488591 MEIKINA0A087WXM9 373 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 TRDV1A0A1B0GX56 115 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A10PA6NDY2 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A18PA6NE21 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A16PA6NEW6 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A20PA6NIJ5 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A8PA6NJQ4 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A7PA6NKC0 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A22PA8MWA6 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A12PA8MX19 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A5PA8MXJ8 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A23PA8MXZ1 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 MCRIP1C9JLW8 97 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 PDCD5O14737 125 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 HOXA3O43365 443 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-207ENST00000488591 CLPXO76031 633 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 MELTFP08582 738 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A15PP0C7V4 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A13PP0C7W8 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A14PP0C7W9 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 FAM90A24PP0C7X0 464 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 GALP22466 123 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 SAA4P35542 130 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 ACTG1P63261 375 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 RBM39Q14498 530 aaKnown RBP12.29□□□□□ -0.44
CXCL12-207ENST00000488591 TCF23Q7RTU1 214 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 TMEM86BQ8N661 226 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 OR6M1Q8NGM8 313 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 SPATA3Q8NHX4 192 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 NEK7Q8TDX7 302 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 SSMEM1Q8WWF3 244 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 C1orf147Q96MC9 270 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-207ENST00000488591 DPAGT1Q9H3H5 408 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 KIF25Q9UIL4 384 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 AK6Q9Y3D8 172 aaKnown RBP12.29□□□□□ -0.44
CXCL12-207ENST00000488591 POMT1Q9Y6A1 747 aa12.29□□□□□ -0.44
CXCL12-207ENST00000488591 BTBD17A6NE02 478 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-207ENST00000488591 SLC22A1O15245 554 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 TNFAIP8O95379 198 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 RNASE1P07998 156 aaKnown RBP12.28□□□□□ -0.44
CXCL12-207ENST00000488591 CD37P11049 281 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 MYL9P24844 172 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 PAX5Q02548 391 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 SLC35E4Q6ICL7 350 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 CD200R1LQ6Q8B3 271 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 LDLRAD3Q86YD5 345 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-207ENST00000488591 TMEM104Q8NE00 496 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 KCNG3Q8TAE7 436 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 FAM46BQ96A09 425 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 V9GY05 133 aa12.28□□□□□ -0.44
CXCL12-207ENST00000488591 TRAV1-2A0A0B4J238 106 aa12.27□□□□□ -0.45
CXCL12-207ENST00000488591 TMEM30CPA0ZSE6 113 aa12.27□□□□□ -0.45
CXCL12-207ENST00000488591 SLC17A2O00624 439 aa12.27□□□□□ -0.45
CXCL12-207ENST00000488591 BPNT1O95861 308 aa12.27□□□□□ -0.45
CXCL12-207ENST00000488591 MPIG6BO95866 241 aa12.27□□□□□ -0.45
CXCL12-207ENST00000488591 ARG1P05089 322 aa12.27□□□□□ -0.45
CXCL12-207ENST00000488591 ARSBP15848 533 aa12.27□□□□□ -0.45
CXCL12-207ENST00000488591 FUT3P21217 361 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms