RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CLDND2Q8NHS1 167 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 TSEN15Q8WW01 171 aaKnown RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 FLYWCH2Q96CP2 140 aaKnown RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 CCDC126Q96EE4 140 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 DNAJC1Q96KC8 554 aaKnown RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 JSRP1Q96MG2 331 aaPredicted RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 RNF5Q99942 180 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 PKIBQ9C010 78 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 CLSTN2Q9H4D0 955 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 AGPAT3Q9NRZ7 376 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 SLC2A8Q9NY64 477 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 PSMC3IPQ9P2W1 217 aaPredicted RBP2.26□□□□□ -2.05
ITGB1-214ENST00000488427 EXTL2Q9UBQ6 330 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 SLC7A8Q9UHI5 535 aa2.26□□□□□ -2.05
ITGB1-214ENST00000488427 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 GLYATL1P3A0A0U1RQE8 302 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 C1orf232A0A0U1RR37 186 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 CENPVL3A0A0U1RRI6 287 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 UBXN8O00124 270 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 CHST10O43529 356 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 DEDDO75618 318 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 OR2J2O76002 312 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 LHBP01229 141 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 CD74P04233 296 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 CCL3P10147 92 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 RAB3AP20336 220 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 DEKP35659 375 aaKnown RBP2.25□□□□□ -2.05
ITGB1-214ENST00000488427 TMED10P49755 219 aaKnown RBP2.25□□□□□ -2.05
ITGB1-214ENST00000488427 ZNF138P52744 262 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 PLP1P60201 277 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 YWHAEP62258 255 aaKnown RBP2.25□□□□□ -2.05
ITGB1-214ENST00000488427 SNRPD2P62316 118 aaKnown RBP2.25□□□□□ -2.05
ITGB1-214ENST00000488427 TSC22D1Q15714 1073 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 PDPK2PQ6A1A2 396 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 NANOGNBQ7Z5D8 188 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 OR2A1Q8NGT9 310 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 PLPPR1Q8TBJ4 325 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 PIH1D2Q8WWB5 315 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 POP5Q969H6 163 aaKnown RBP2.25□□□□□ -2.05
ITGB1-214ENST00000488427 MRGPRFQ96AM1 343 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 S100PBPQ96BU1 408 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 TIMM17AQ99595 171 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 CCDC77Q9BR77 488 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 DRC3Q9H069 523 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 PPIL1Q9Y3C6 166 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
ITGB1-214ENST00000488427 TNCP24821 2201 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 A0A0J9YYE9 177 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 A0A0U1RQV1 116 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 ZNF816-ZNF321PA0A0X1KG74 233 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 MGAT4DA6NG13 374 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 SLC22A20A6NK97 555 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 OR2AG2A6NM03 316 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 ZNF207O43670 478 aaKnown RBP2.24□□□□□ -2.05
ITGB1-214ENST00000488427 CCNKO75909 580 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 CDRT1O95170 752 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 TRBC1P01850 177 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 ERCC1P07992 297 aaPredicted RBP2.24□□□□□ -2.05
ITGB1-214ENST00000488427 IL32P24001 234 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 CEACAM3P40198 252 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 HCAR3P49019 387 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 CDK9P50750 372 aaKnown RBP2.24□□□□□ -2.05
ITGB1-214ENST00000488427 SNRPFP62306 86 aaKnown RBP2.24□□□□□ -2.05
ITGB1-214ENST00000488427 AVPI1Q5T686 147 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 PRAMEF5Q5TYX0 476 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 PRAMEF20Q5VT98 475 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 PRAMEF6Q5VXH4 476 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 ZFP1Q6P2D0 407 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 CEMP1Q6PRD7 247 aaPredicted RBP2.24□□□□□ -2.05
ITGB1-214ENST00000488427 TMEM220Q6QAJ8 160 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 UNQ9165/PRO28630Q6UXU0 137 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 LRP11Q86VZ4 500 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 TRAM1L1Q8N609 369 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 PLPP5Q8NEB5 264 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 WFDC9Q8NEX5 89 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 B3GNT7Q8NFL0 401 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 OR13G1Q8NGZ3 307 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 OR8U1Q8NH10 309 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 OR51Q1Q8NH59 317 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 TSLPQ969D9 159 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 PKNOX2Q96KN3 472 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 FRMD8P1Q9BZ68 369 aaPredicted RBP2.24□□□□□ -2.05
ITGB1-214ENST00000488427 RAB1BQ9H0U4 201 aa2.24□□□□□ -2.05
ITGB1-214ENST00000488427 ZMAT5Q9UDW3 170 aaKnown RBP2.24□□□□□ -2.05
ITGB1-214ENST00000488427 DNAH11Q96DT5 4516 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 FAT4Q6V0I7 4981 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 HMCN2Q8NDA2 5059 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 MDFIC2A0A1B0GVS7 189 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 SIGLEC16A6NMB1 481 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 LYRM9A8MSI8 78 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 H0Y8G0 127 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 GCM2O75603 506 aaPredicted RBP2.23□□□□□ -2.05
ITGB1-214ENST00000488427 C1QAP02745 245 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 PAEPP09466 180 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 OR5H8P0DN80 308 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 PEBP1P30086 187 aaKnown RBP2.23□□□□□ -2.05
ITGB1-214ENST00000488427 GCLMP48507 274 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 P2RX1P51575 399 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 UBE2HP62256 183 aa2.23□□□□□ -2.05
ITGB1-214ENST00000488427 MXD1Q05195 221 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms