RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 NFYBP25208 207 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 C21orf33P30042 268 aaPredicted RBP18.08■□□□□ 0.48
PTPN4-211ENST00000488279 SOX2P48431 317 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 RBM39Q14498 530 aaKnown RBP18.08■□□□□ 0.48
PTPN4-211ENST00000488279 RSU1Q15404 277 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 ZSCAN26Q16670 478 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 HLA-DRB5Q30154 266 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 CCDC58Q4VC31 144 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 PAN3Q58A45 887 aaKnown RBP18.08■□□□□ 0.48
PTPN4-211ENST00000488279 CCDC144NLQ6NUI1 221 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 ZNF529Q6P280 563 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 RPL22L1Q6P5R6 122 aaKnown RBP18.08■□□□□ 0.48
PTPN4-211ENST00000488279 CENPVQ7Z7K6 275 aaPredicted RBP18.08■□□□□ 0.48
PTPN4-211ENST00000488279 ZNF555Q8NEP9 628 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 CNIH3Q8TBE1 160 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 GPR148Q8TDV2 347 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 TNFAIP8L1Q8WVP5 186 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 APH1BQ8WW43 257 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 JAM3Q9BX67 310 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 NCOR1P1Q9H4R4 102 aa18.08■□□□□ 0.48
PTPN4-211ENST00000488279 FGF20Q9NP95 211 aaPredicted RBP18.08■□□□□ 0.48
PTPN4-211ENST00000488279 MEIKINA0A087WXM9 373 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 TRAV24A0A0B4J272 114 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 ADARB2-AS1A8MUL3 147 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 OOSP1A8MZH6 123 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 LY6LH3BQJ8 138 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 BAG2O95816 211 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 CD2P06729 351 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 MNDAP41218 407 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 OR3A4PP47883 348 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 IL13RA2Q14627 380 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 TPTE2P1Q5T6R2 138 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 OR51A2Q8NGJ7 313 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 RBM14Q96PK6 669 aaKnown RBP18.07■□□□□ 0.48
PTPN4-211ENST00000488279 SLC25A33Q9BSK2 321 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 FAM192AQ9GZU8 254 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 TAS2R4Q9NYW5 299 aa18.07■□□□□ 0.48
PTPN4-211ENST00000488279 GABRPO00591 440 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 OR2F2O95006 317 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 CGB3P0DN86 165 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 CGB7P0DN87 165 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 GLP1RP43220 463 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 SMN1Q16637 294 aaKnown RBP18.06■□□□□ 0.48
PTPN4-211ENST00000488279 ABCA11PQ4W5N1 156 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 KIAA2026Q5HYC2 2103 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 TMPRSS11AQ6ZMR5 421 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 OR9G1Q8NH87 305 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 RGP1Q92546 391 aaPredicted RBP18.06■□□□□ 0.48
PTPN4-211ENST00000488279 KIRREL1Q96J84 757 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 KIF25Q9UIL4 384 aa18.06■□□□□ 0.48
PTPN4-211ENST00000488279 WBP4O75554 376 aaKnown RBP18.05■□□□□ 0.48
PTPN4-211ENST00000488279 DCKP27707 260 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 KCNJ3P48549 501 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 ETV1P50549 477 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 CD83Q01151 205 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 OXLD1Q5BKU9 147 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 ASCL4Q6XD76 172 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 REC114Q7Z4M0 266 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 Q8NFD4 153 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 OR10K1Q8NGX5 313 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 RDH12Q96NR8 316 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 SMPD3Q9NY59 655 aaPredicted RBP18.05■□□□□ 0.48
PTPN4-211ENST00000488279 CALYQ9NYX4 217 aa18.05■□□□□ 0.48
PTPN4-211ENST00000488279 M0QZK8 103 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 EBAG9O00559 213 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 HTR3BO95264 441 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 LPLP06858 475 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 FAM106CPP0CH98 169 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 PIGYQ3MUY2 71 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 UTF1Q5T230 341 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 OR13A1Q8NGR1 328 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 TMEM106AQ96A25 262 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 RPEQ96AT9 228 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 LINC00574Q9H8X3 128 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 TMEM138Q9NPI0 162 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 PCDHB16Q9NRJ7 776 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 IDI2-AS1Q9NZ38 188 aa18.04■□□□□ 0.48
PTPN4-211ENST00000488279 AMMECR1Q9Y4X0 333 aaPredicted RBP18.04■□□□□ 0.48
PTPN4-211ENST00000488279 A0A1W2PRX2 142 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 IRGMA1A4Y4 181 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 J3QR06 171 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 PLXNB1O43157 2135 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 PPP3R1P63098 170 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 PAX5Q02548 391 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 XAF1Q6GPH4 301 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 BABAM2Q9NXR7 383 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 ING4Q9UNL4 249 aa18.03■□□□□ 0.48
PTPN4-211ENST00000488279 TCRBV4S1A1TA0A5B7 111 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 CDRT1O95170 752 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 IL1AP01583 271 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 PRB2P02812 416 aaPredicted RBP18.02■□□□□ 0.48
PTPN4-211ENST00000488279 AMY1AP04745 511 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 AMY2AP04746 511 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 MYL12AP19105 171 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 ZNF93P35789 620 aaPredicted RBP18.02■□□□□ 0.48
PTPN4-211ENST00000488279 FBLN7Q53RD9 439 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 OR2G6Q5TZ20 316 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 RSBN1Q5VWQ0 802 aaPredicted RBP18.02■□□□□ 0.48
PTPN4-211ENST00000488279 THNSL2Q86YJ6 484 aa18.02■□□□□ 0.48
PTPN4-211ENST00000488279 MRGPRDQ8TDS7 321 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms