RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 LRTM1Q9HBL6 345 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 ACOT13Q9NPJ3 140 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 MMP26Q9NRE1 261 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 DNAJC27Q9NZQ0 273 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 SLC2A6Q9UGQ3 507 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 NTNG1Q9Y2I2 539 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 RCL1Q9Y2P8 373 aaKnown RBP3.25□□□□□ -1.89
VPS8-224ENST00000488255 POLR1DQ9Y2S0 133 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 NAIPQ13075 1403 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 A0A1W2PP64 1363 aa3.25□□□□□ -1.89
VPS8-224ENST00000488255 IGSF9BQ9UPX0 1349 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 CAMSAP1Q5T5Y3 1602 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 A0A096LPI6 279 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 TMEM189A5PLL7 270 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 OR5H14A6NHG9 310 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 TYROBPO43914 113 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 GPR75O95800 540 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 CD160O95971 181 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 JCHAINP01591 159 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 C1QCP02747 245 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 UBBP0CG47 229 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 MPC1LP0DKB6 136 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 S100A2P29034 98 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 DDOSTP39656 456 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 HCCSP53701 268 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 FBXW4P57775 412 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 OR12D2P58182 307 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 EIF5AP63241 154 aaKnown RBP3.24□□□□□ -1.89
VPS8-224ENST00000488255 RAB40BQ12829 278 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 SKP2Q13309 424 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 ZIC1Q15915 447 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 SSX1Q16384 188 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 NRF1Q16656 503 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 GUCA2BQ16661 112 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 TP53I3Q53FA7 332 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 TFDP3Q5H9I0 405 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 WDR82Q6UXN9 313 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 TFAP2EQ6VUC0 442 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 SLC25A48Q6ZT89 311 aaKnown RBP3.24□□□□□ -1.89
VPS8-224ENST00000488255 MOB1BQ7L9L4 216 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 HSD11B1LQ7Z5J1 315 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 TSEN54Q7Z6J9 526 aaKnown RBP3.24□□□□□ -1.89
VPS8-224ENST00000488255 ZADH2Q8N4Q0 377 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 SMIM20Q8N5G0 67 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 ARIH2OSQ8N7S6 290 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 COX18Q8N8Q8 333 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 WDR31Q8NA23 367 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 SLC30A7Q8NEW0 376 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 OR2K2Q8NGT1 345 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 OR6N1Q8NGY5 312 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 ZNF675Q8TD23 568 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 GNPDA2Q8TDQ7 276 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 S100ZQ8WXG8 99 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 NDRG1Q92597 394 aaKnown RBP3.24□□□□□ -1.89
VPS8-224ENST00000488255 FGGYQ96C11 551 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 MALSU1Q96EH3 234 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 ACY3Q96HD9 319 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 SEC22AQ96IW7 307 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 ADTRPQ96IZ2 230 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 RNF157Q96PX1 679 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 ZNF382Q96SR6 550 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 MRPL45Q9BRJ2 306 aaKnown RBP3.24□□□□□ -1.89
VPS8-224ENST00000488255 ZNF649Q9BS31 505 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 APOOQ9BUR5 198 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 FAIM2Q9BWQ8 316 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 EBPLQ9BY08 206 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 SLC17A9Q9BYT1 436 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 DCSTAMPQ9H295 470 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 TAF9BQ9HBM6 251 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 LYRM2Q9NU23 88 aaPredicted RBP3.24□□□□□ -1.89
VPS8-224ENST00000488255 DCAF13Q9NV06 445 aaKnown RBP3.24□□□□□ -1.89
VPS8-224ENST00000488255 VPREB3Q9UKI3 123 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 TP53TG1Q9Y2A0 90 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 NOS1P29475 1434 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 FGD6Q6ZV73 1430 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 NSD3Q9BZ95 1437 aa3.24□□□□□ -1.89
VPS8-224ENST00000488255 SPEF2Q9C093 1822 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 SYNJ2O15056 1496 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 NCAPD3P42695 1498 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 GAPVD1Q14C86 1478 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 TMEM218A2RU14 115 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 MEIS3P1A6NDR6 274 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 OR5H1A6NKK0 313 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 OR5B21A6NL26 309 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 TRIM49D1C9J1S8 452 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 H7C417 338 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 J3QLI3 93 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 UPK1AO00322 258 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 TOXO94900 526 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 CDRT1O95170 752 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 NDUFC2O95298 119 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 CATP04040 527 aaKnown RBP3.23□□□□□ -1.89
VPS8-224ENST00000488255 FGF1P05230 155 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 UCHL1P09936 223 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 SMIM17P0DL12 118 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 CT45A6P0DMU7 189 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 CT45A5P0DMU8 189 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 CT45A7P0DMV0 189 aa3.23□□□□□ -1.89
VPS8-224ENST00000488255 HIST1H1BP16401 226 aaKnown RBP3.23□□□□□ -1.89
VPS8-224ENST00000488255 ZNF17P17021 662 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms