RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FAM19A1Q7Z5A9 133 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 LINC00523Q86TU6 105 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 CYP4Z1Q86W10 505 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 ZIC4Q8N9L1 334 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 BBOF1Q8ND07 529 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 OR52K1Q8NGK4 314 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 OR4C16Q8NGL9 310 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 OR6K3Q8NGY3 331 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 PEX13Q92968 403 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 BIRC8Q96P09 236 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 POMKQ9H5K3 350 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 SLC23A2Q9UGH3 650 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 KPTNQ9Y664 436 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 URGCP-MRPS24S4R325 110 aa0.55□□□□□ -2.32
SMC4-219ENST00000487747 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 GOLGA6L7A0A1B0GV03 622 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 F5H5T6 163 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 TMEM250H0YL14 139 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 TP53I11O14683 189 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 MYO1DO94832 1006 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 CA2P00918 260 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 OR12D1P0DN82 309 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 IL12BP29460 328 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 EVI2BP34910 448 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 PEX19P40855 299 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 PLTPP55058 493 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 PRDX4Q13162 271 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 N4BP2L1Q5TBK1 243 aaPredicted RBP0.54□□□□□ -2.32
SMC4-219ENST00000487747 KRTCAP2Q8N6L1 136 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 FER1L6-AS1Q8NA97 138 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 GPR119Q8TDV5 335 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 KCTD4Q8WVF5 259 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 TWIST2Q8WVJ9 160 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 ZNF625Q96I27 306 aaPredicted RBP0.54□□□□□ -2.32
SMC4-219ENST00000487747 ZNF251Q9BRH9 671 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 ANAPC13Q9BS18 74 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 NXF2Q9GZY0 626 aaKnown RBP0.54□□□□□ -2.32
SMC4-219ENST00000487747 ARL6Q9H0F7 186 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 ACOT13Q9NPJ3 140 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 LZTFL1Q9NQ48 299 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 DNAJC27Q9NZQ0 273 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 AMMECR1Q9Y4X0 333 aaPredicted RBP0.54□□□□□ -2.32
SMC4-219ENST00000487747 WDR19Q8NEZ3 1342 aa0.54□□□□□ -2.32
SMC4-219ENST00000487747 TRAV8-3A0A0A6YYJ7 113 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 MUC21A0A0G2JKD1 596 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 MUC21A0A140T8X8 626 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 LOC100653049A0A140TA62 436 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 LOC102725191A0A1B0GVB3 256 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 A0A1W2PQL4 384 aaPredicted RBP0.53□□□□□ -2.32
SMC4-219ENST00000487747 TVP23AA6NH52 213 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 ZNF860A6NHJ4 632 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 NCF1BA6NI72 391 aaPredicted RBP0.53□□□□□ -2.32
SMC4-219ENST00000487747 NCF1CA8MVU1 366 aaPredicted RBP0.53□□□□□ -2.32
SMC4-219ENST00000487747 KLRC4-KLRK1H3BQV0 150 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 H3BRN7 92 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 K7EN84 100 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 M0QXV9 152 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 PRMT5O14744 637 aaPredicted RBP0.53□□□□□ -2.32
SMC4-219ENST00000487747 KDELR3O43731 214 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 KRT34O76011 436 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 RAB36O95755 333 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 GUSBP08236 651 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 SFTPCP11686 197 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 GCLMP48507 274 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 GOLGA7BQ2TAP0 167 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 ACSBG2Q5FVE4 666 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 NIPAL1Q6NVV3 410 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 ARHGAP18Q8N392 663 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 DEFB119Q8N690 84 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 OR11G2Q8NGC1 345 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 OR51L1Q8NGJ5 315 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 OR5C1Q8NGR4 320 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 OR4A5Q8NH83 315 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 AGR3Q8TD06 166 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 BLNKQ8WV28 456 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 HIST1H2BAQ96A08 127 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 REEP6Q96HR9 211 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 CPB2Q96IY4 423 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 ADTRPQ96IZ2 230 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 LINC01587Q99440 93 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 MAP1LC3CQ9BXW4 147 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 TDRD3Q9H7E2 651 aaKnown RBP0.53□□□□□ -2.32
SMC4-219ENST00000487747 PHLDA3Q9Y5J5 127 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 TTC41PQ6P2S7 1318 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 ARHGAP32A7KAX9 2087 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 CRB1P82279 1406 aa0.53□□□□□ -2.32
SMC4-219ENST00000487747 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.33
SMC4-219ENST00000487747 NCKAP5O14513 1909 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 CCDC88CQ9P219 2028 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 SDK1Q7Z5N4 2213 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 IGHV2-26A0A0B4J1V2 119 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 IGKV2-29A2NJV5 120 aaPredicted RBP0.52□□□□□ -2.33
SMC4-219ENST00000487747 ERICH4A6NGS2 130 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 PLPP3O14495 311 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 SLC25A20O43772 301 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 GYPCP04921 128 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 ZNF7P17097 686 aaPredicted RBP0.52□□□□□ -2.33
SMC4-219ENST00000487747 PRKACAP17612 351 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 TTPAP49638 278 aa0.52□□□□□ -2.33
SMC4-219ENST00000487747 BCAP31P51572 246 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms