RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ISOC2Q96AB3 205 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 HAUS1Q96CS2 278 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 NARS2Q96I59 477 aaKnown RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF488Q96MN9 340 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 KLF6Q99612 283 aaPredicted RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 ADA2Q9NZK5 511 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF282Q9UDV7 671 aaPredicted RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 DNHD1Q96M86 4753 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 MTORP42345 2549 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 ANKHD1Q8IWZ3 2542 aaKnown RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 MDC1Q14676 2089 aaKnown RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF469Q96JG9 3925 aaPredicted RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 PCM1Q15154 2024 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 CCDC88CQ9P219 2028 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 TRAV6A0A075B6T7 132 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 IGHV3OR16-9A0A0B4J2B5 98 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 C5orf63A6NC05 138 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 K7ERQ8 282 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 SOCS1O15524 211 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 RBFOX2O43251 390 aaKnown RBP eCLIP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF207O43670 478 aaKnown RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 MPDU1O75352 247 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 SLC22A5O76082 557 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 VAMP5O95183 116 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 ASS1P00966 412 aaKnown RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 CTSEP14091 401 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 PMCHP20382 165 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 CD9P21926 228 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 CDK5Q00535 292 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 EIF4EBP1Q13541 118 aaPredicted RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 TFDP2Q14188 446 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 ELOCQ15369 112 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 RBMY1FQ15415 496 aaKnown RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 MPV17L2Q567V2 206 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 RWDD4Q6NW29 188 aaKnown RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 SLC16A13Q7RTY0 426 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 GKN2Q86XP6 184 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 ZGRF1Q86YA3 2104 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 NELFCDQ8IXH7 590 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 TMEM104Q8NE00 496 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 CCDC112Q8NEF3 446 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 NDNFQ8TB73 568 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 TCP10LQ8TDR4 215 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 BAALCQ8WXS3 180 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 FRZBQ92765 325 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 CTRCQ99895 268 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 LLPHQ9BRT6 129 aaKnown RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 DDA1Q9BW61 102 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 FGF23Q9GZV9 251 aaPredicted RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 CHRNA10Q9GZZ6 450 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 RBMX2Q9Y388 322 aaKnown RBP2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 CCDC168Q8NDH2 2452 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 SPG11Q96JI7 2443 aa2.97□□□□□ -1.93
PRPF38A-203ENST00000487160 MAP1AP78559 2803 aaPredicted RBP2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 IGKV2-28A0A075B6P5 120 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 KRBOX1C9JBD0 128 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 F5H5T6 163 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 BPY2O14599 106 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 IGKV2D-28P01615 120 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 HLA-DRAP01903 254 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 PRB2P02812 416 aaPredicted RBP2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 CATP04040 527 aaKnown RBP2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 GLAP06280 429 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 THRAP10827 490 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 PRKACBP22694 351 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 F8A1P23610 371 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 MYL9P24844 172 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 TALDO1P37837 337 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 MYCNOSP40205 109 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 PPICP45877 212 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 GFERP55789 205 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 GOLGA7BQ2TAP0 167 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 KCTD16Q68DU8 428 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 C22orf39Q6P5X5 142 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 SPNS3Q6ZMD2 512 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 SERPINB11Q96P15 392 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 AGMATQ9BSE5 352 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 MAP1LC3CQ9BXW4 147 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 SAMD10Q9BYL1 202 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 TM6SF2Q9BZW4 377 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 RRAGDQ9NQL2 400 aaPredicted RBP2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 NECAP2Q9NVZ3 263 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 HS3ST2Q9Y278 367 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 FADS3Q9Y5Q0 445 aa2.96□□□□□ -1.94
PRPF38A-203ENST00000487160 ABCA2Q9BZC7 2435 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 CACNA1CQ13936 2221 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 NDUFC2-KCTD14E9PQ53 114 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 H0YJW9 148 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 SLC16A7O60669 478 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 ETHE1O95571 254 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 HLA-DQA1P01909 254 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 APOEP02649 317 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 LINC00869P0C866 280 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 GGT2P36268 569 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 POLR2IP36954 125 aaKnown RBP2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 AP1S2P56377 157 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 CRADDP78560 199 aa2.95□□□□□ -1.94
PRPF38A-203ENST00000487160 XRCC4Q13426 336 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms