RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 TRAPPC2BP0DI82 140 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 ZNF14P17017 642 aaPredicted RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 CELP19835 753 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 ERP29P30040 261 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SLCO1A2P46721 670 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SLC18A1P54219 525 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TMBIM6P55061 237 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 COPZ1P61923 177 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 UBE2IP63279 158 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 FUT5Q11128 374 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 STX4Q12846 297 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 BNIP2Q12982 314 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 POU6F1Q14863 301 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 CDK10Q15131 360 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TRIP13Q15645 432 aaPredicted RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 CCL15Q16663 113 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 ZNF181Q2M3W8 571 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 HNRNPA1L2Q32P51 320 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 KRTAP13-2Q52LG2 175 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 C6orf52Q5T4I8 152 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 PTRHD1Q6GMV3 140 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TPGS1Q6ZTW0 290 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 COPS6Q7L5N1 327 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 ARPINQ7Z6K5 226 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 PLCZ1Q86YW0 608 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 ZNF565Q8N9K5 539 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 APCDD1LQ8NCL9 501 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 ZNF680Q8NEM1 530 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 OR2Z1Q8NG97 314 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 OR4M2Q8NGB6 313 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 OR4A15Q8NGL6 344 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 CLHC1Q8NHS4 586 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SFXN5Q8TD22 340 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 RAB2BQ8WUD1 216 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 ING5Q8WYH8 240 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 S100PBPQ96BU1 408 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TLCD1Q96CP7 247 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 Q96MT0 163 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SERPINB11Q96P15 392 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TSNAXQ99598 290 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 GABRG3Q99928 467 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 MROQ9BYG7 248 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 GOLPH3Q9H4A6 298 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 CSNK1G1Q9HCP0 422 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 BIN3Q9NQY0 253 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TMEM100Q9NV29 134 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 IL37Q9NZH6 218 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 MARCOQ9UEW3 520 aaPredicted RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 VAX2Q9UIW0 290 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 RAB23Q9ULC3 237 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 NDUFAF1Q9Y375 327 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 RBMX2Q9Y388 322 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 PRELID3BQ9Y3B1 194 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 KLF12Q9Y4X4 402 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 DISP1Q96F81 1524 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SYCP2Q9BX26 1530 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 DNMT1P26358 1616 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 TARBP1Q13395 1621 aaKnown RBP1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 IFT172Q9UG01 1749 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 GRIN2BQ13224 1484 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 IQSEC2Q5JU85 1478 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 SCN4AP35499 1836 aa1.94□□□□□ -2.1
SNRNP27-204ENST00000487029 MROH5Q6ZUA9 1318 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 IQGAP1P46940 1657 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 CUL7Q14999 1698 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 ZC3H13Q5T200 1668 aaKnown RBP1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 CD109Q6YHK3 1445 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 DUOX2Q9NRD8 1548 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 ADCY10Q96PN6 1610 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 ZNF98A6NK75 572 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 HSBP1L1C9JCN9 74 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 H7C2Y5 167 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 NDUFS8O00217 210 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 PSMD12O00232 456 aaPredicted RBP1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 RGS5O15539 181 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 NDUFA2O43678 99 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 TRAPPC6AO75865 159 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 LDOC1O95751 146 aaPredicted RBP1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 DHFRP00374 187 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 IFNA7P01567 189 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 FABP1P07148 127 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 MMP7P09237 267 aaPredicted RBP1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 RBP1P09455 135 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 CD40LGP29965 261 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 PRSS3P35030 304 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 RAB13P51153 203 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 AKR1D1P51857 326 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 CEBPGP53567 150 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 CMC4P56277 68 aaPredicted RBP1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 MTPNP58546 118 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 TAS2R43P59537 309 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 TAS2R60P59551 318 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 SNAP25P60880 206 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 PPP1CAP62136 330 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 DEFA6Q01524 100 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 SAPCD1Q5SSQ6 148 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 DEGS2Q6QHC5 323 aa1.93□□□□□ -2.1
SNRNP27-204ENST00000487029 UGT2A3Q6UWM9 527 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms