RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 GABRPO00591 440 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 XPNPEP2O43895 674 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 LPLP06858 475 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 LIMS3P0CW19 117 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 LIMS4P0CW20 117 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 CGB3P0DN86 165 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 CGB7P0DN87 165 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 RAB3AP20336 220 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 CD83Q01151 205 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 MRPL28Q13084 256 aaKnown RBP19.6■□□□□ 0.73
LIME1-206ENST00000487026 KLHL22Q53GT1 634 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 PAN3Q58A45 887 aaKnown RBP19.6■□□□□ 0.73
LIME1-206ENST00000487026 ELP2Q6IA86 826 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 C16orf82Q7Z2V1 217 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 CENPVQ7Z7K6 275 aaPredicted RBP19.6■□□□□ 0.73
LIME1-206ENST00000487026 OR51T1Q8NGJ9 327 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 OR13A1Q8NGR1 328 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 CNIH3Q8TBE1 160 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 LEAP2Q969E1 77 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 MRPS18AQ9NVS2 196 aaKnown RBP19.6■□□□□ 0.73
LIME1-206ENST00000487026 TAS2R4Q9NYW5 299 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 OR6C3Q9NZP0 311 aa19.6■□□□□ 0.73
LIME1-206ENST00000487026 DNAH3Q8TD57 4116 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 MEIKINA0A087WXM9 373 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 KBTBD11-OT1A0A1B0GTJ5 212 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 RPSAP08865 295 aaKnown RBP19.59■□□□□ 0.73
LIME1-206ENST00000487026 CEACAM3P40198 252 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 GLP1RP43220 463 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 TCTEX1D4Q5JR98 221 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 XAF1Q6GPH4 301 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 ZNF529Q6P280 563 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 C10orf67Q8IYJ2 551 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 PXT1Q8NFP0 134 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 KIRREL1Q96J84 757 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 AKR1E2Q96JD6 320 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 RBM14Q96PK6 669 aaKnown RBP19.59■□□□□ 0.73
LIME1-206ENST00000487026 JAM3Q9BX67 310 aa19.59■□□□□ 0.73
LIME1-206ENST00000487026 A0A087X0M5 115 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 A0A1B0GX30 115 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 MAGEB3O15480 346 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 OR2F2O95006 317 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 AMY1AP04745 511 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 AMY2AP04746 511 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 ARHGDIBP52566 201 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 PIGYQ3MUY2 71 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 Q6ZPA2 131 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 PQLC1Q8N2U9 271 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 ZNF565Q8N9K5 539 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 CREB3L1Q96BA8 519 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 FAM192AQ9GZU8 254 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 CALYQ9NYX4 217 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 ZNF581Q9P0T4 197 aa19.58■□□□□ 0.72
LIME1-206ENST00000487026 TRAV39A0A0B4J263 110 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 WBP4O75554 376 aaKnown RBP19.57■□□□□ 0.72
LIME1-206ENST00000487026 ETV1P50549 477 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 RSU1Q15404 277 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 LTC4SQ16873 150 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 C9orf152Q5JTZ5 239 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 C10orf99Q6UWK7 81 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 RFESDQ8TAC1 157 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 PLPPR1Q8TBJ4 325 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 SGCDQ92629 289 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 BARHL1Q9BZE3 327 aa19.57■□□□□ 0.72
LIME1-206ENST00000487026 FGF20Q9NP95 211 aaPredicted RBP19.57■□□□□ 0.72
LIME1-206ENST00000487026 TCRBV4S1A1TA0A5B7 111 aa19.56■□□□□ 0.72
LIME1-206ENST00000487026 CDRT1O95170 752 aa19.56■□□□□ 0.72
LIME1-206ENST00000487026 HTR3BO95264 441 aa19.56■□□□□ 0.72
LIME1-206ENST00000487026 OR9G1Q8NH87 305 aa19.56■□□□□ 0.72
LIME1-206ENST00000487026 ORAI1Q96D31 301 aa19.56■□□□□ 0.72
LIME1-206ENST00000487026 IDI2-AS1Q9NZ38 188 aa19.56■□□□□ 0.72
LIME1-206ENST00000487026 ING4Q9UNL4 249 aa19.56■□□□□ 0.72
LIME1-206ENST00000487026 SIRT4Q9Y6E7 314 aaPredicted RBP19.56■□□□□ 0.72
LIME1-206ENST00000487026 J3QR06 171 aa19.55■□□□□ 0.72
LIME1-206ENST00000487026 BAG2O95816 211 aa19.55■□□□□ 0.72
LIME1-206ENST00000487026 C21orf33P30042 268 aaPredicted RBP19.55■□□□□ 0.72
LIME1-206ENST00000487026 MNDAP41218 407 aa19.55■□□□□ 0.72
LIME1-206ENST00000487026 IL13RA2Q14627 380 aa19.55■□□□□ 0.72
LIME1-206ENST00000487026 OR2G6Q5TZ20 316 aa19.55■□□□□ 0.72
LIME1-206ENST00000487026 RSBN1Q5VWQ0 802 aaPredicted RBP19.55■□□□□ 0.72
LIME1-206ENST00000487026 RPL22L1Q6P5R6 122 aaKnown RBP19.55■□□□□ 0.72
LIME1-206ENST00000487026 ASCL4Q6XD76 172 aa19.55■□□□□ 0.72
LIME1-206ENST00000487026 MRGPRDQ8TDS7 321 aa19.55■□□□□ 0.72
LIME1-206ENST00000487026 GPR148Q8TDV2 347 aa19.55■□□□□ 0.72
LIME1-206ENST00000487026 CPNE2Q96FN4 548 aaPredicted RBP19.55■□□□□ 0.72
LIME1-206ENST00000487026 IGLL1P15814 213 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 DIAPH2-AS1Q14236 149 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 CCDC144NLQ6NUI1 221 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 ZNF555Q8NEP9 628 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 Q8NFD4 153 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 MYDGFQ969H8 173 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 TOMM40LQ969M1 308 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 TMEM106AQ96A25 262 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 RPEQ96AT9 228 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 PHF21AQ96BD5 680 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 PSG11Q9UQ72 335 aa19.54■□□□□ 0.72
LIME1-206ENST00000487026 OOSP1A8MZH6 123 aa19.53■□□□□ 0.72
LIME1-206ENST00000487026 CLIC3O95833 236 aa19.53■□□□□ 0.72
LIME1-206ENST00000487026 IL1AP01583 271 aa19.53■□□□□ 0.72
LIME1-206ENST00000487026 CD2P06729 351 aa19.53■□□□□ 0.72
LIME1-206ENST00000487026 PF4V1P10720 104 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms