RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 COMMD7Q86VX2 200 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 OR8G5Q8NG78 346 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 TMEM100Q9NV29 134 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 RASL12Q9NYN1 266 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 LUZP4Q9P127 313 aa17.31■□□□□ 0.36
HPS3-206ENST00000486530 PIEZO1Q92508 2521 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 HS3ST1O14792 307 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 DEGS1O15121 323 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 OR5AC1P0C628 307 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 PGA5P0DJD9 388 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 ZNF44P15621 663 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 MDH2P40926 338 aaKnown RBP17.3■□□□□ 0.36
HPS3-206ENST00000486530 TMEM187Q14656 261 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 PHLDA2Q53GA4 152 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 Q6P435 159 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 FAM185AQ8N0U4 392 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 RDH5Q92781 318 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 NRIP2Q9BQI9 281 aa17.3■□□□□ 0.36
HPS3-206ENST00000486530 IGHV2OR16-5A0A0B4J2B6 119 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 IGHV1-18A0A0C4DH31 117 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 POM121CA8CG34 1229 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 H0YIZ8 118 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 SCTP09683 121 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 RRASP10301 218 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 KITLGP21583 273 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 TIMP3P35625 211 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 BEX5Q5H9J7 111 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 ZNF880Q6PDB4 577 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 LRTM2Q8N967 370 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 ARPC5LQ9BPX5 153 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 TREM2Q9NZC2 230 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 TP53TG5Q9Y2B4 290 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 SLC25A15Q9Y619 301 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 SPENQ96T58 3664 aaKnown RBP17.29■□□□□ 0.36
HPS3-206ENST00000486530 NMBP08949 121 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 ACAA1P09110 424 aaPredicted RBP17.29■□□□□ 0.36
HPS3-206ENST00000486530 IAH1Q2TAA2 248 aaPredicted RBP17.29■□□□□ 0.36
HPS3-206ENST00000486530 FAM180AQ6UWF9 173 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 SLX1AQ9BQ83 275 aa17.29■□□□□ 0.36
HPS3-206ENST00000486530 DMXL2Q8TDJ6 3036 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 SPTBN4Q9H254 2564 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 H0YL77 283 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 CDIPTO14735 213 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 BET1O15155 118 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 RLN2P04090 185 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 NUP62P37198 522 aaPredicted RBP17.28■□□□□ 0.36
HPS3-206ENST00000486530 RAB32Q13637 225 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 HERPUD1Q15011 391 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 ZNF718Q3SXZ3 478 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 SHEQ5VZ18 495 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 GGNBP1Q5YKI7 109 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 LIAT1Q6ZQX7 453 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 ZNF471Q9BX82 626 aaPredicted RBP17.28■□□□□ 0.36
HPS3-206ENST00000486530 GSKIPQ9P0R6 139 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 TINAGQ9UJW2 476 aa17.28■□□□□ 0.36
HPS3-206ENST00000486530 ACACAQ13085 2346 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 H7C1Q1 480 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 MLNRO43193 412 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 TIMM8AO60220 97 aaPredicted RBP17.27■□□□□ 0.36
HPS3-206ENST00000486530 TUSC2O75896 110 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 NXPH2O95156 264 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 LUMP51884 338 aaPredicted RBP17.27■□□□□ 0.36
HPS3-206ENST00000486530 HLA-DRB3P79483 266 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 ZNF146Q15072 292 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 SPIN3Q5JUX0 258 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 MBNL2Q5VZF2 373 aaKnown RBP17.27■□□□□ 0.36
HPS3-206ENST00000486530 MOB1BQ7L9L4 216 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 OR4A4PQ8NGN8 299 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 FAM57AQ8TBR7 257 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 MRPL24Q96A35 216 aaKnown RBP17.27■□□□□ 0.36
HPS3-206ENST00000486530 PHYHIPLQ96FC7 376 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 CXXC4Q9H2H0 198 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 TUBD1Q9UJT1 453 aa17.27■□□□□ 0.36
HPS3-206ENST00000486530 GRPP07492 148 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 HOXD4P09016 255 aaPredicted RBP17.27■□□□□ 0.35
HPS3-206ENST00000486530 GCH1P30793 250 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 PAN3Q58A45 887 aaKnown RBP17.27■□□□□ 0.35
HPS3-206ENST00000486530 ZNF324BQ6AW86 544 aaPredicted RBP17.27■□□□□ 0.35
HPS3-206ENST00000486530 FIP1L1Q6UN15 594 aaKnown RBP17.27■□□□□ 0.35
HPS3-206ENST00000486530 LGI3Q8N145 548 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 ZNF565Q8N9K5 539 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 OR11L1Q8NGX0 322 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 SFXN3Q9BWM7 321 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 MED9Q9NWA0 146 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 OR5AC2Q9NZP5 309 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 DNAJB11Q9UBS4 358 aa17.27■□□□□ 0.35
HPS3-206ENST00000486530 F5H0A9 414 aaPredicted RBP17.26■□□□□ 0.35
HPS3-206ENST00000486530 SLC33A1O00400 549 aaPredicted RBP17.26■□□□□ 0.35
HPS3-206ENST00000486530 OR2H2O95918 312 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 KCNJ3P48549 501 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 S100A10P60903 97 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 RND3P61587 244 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 SP6Q3SY56 376 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 TIMM23BQ5SRD1 257 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 ZNF474Q6S9Z5 364 aaPredicted RBP17.26■□□□□ 0.35
HPS3-206ENST00000486530 C20orf204Q6ZNR8 217 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 RPRMLQ8N4K4 120 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 SPERTQ8NA61 448 aa17.26■□□□□ 0.35
HPS3-206ENST00000486530 RRNAD1Q96FB5 475 aaKnown RBP17.26■□□□□ 0.35
HPS3-206ENST00000486530 FBXO9Q9UK97 447 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms