RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 RNASEK-C17orf49H0YIS7 233 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 ZNF728P0DKX0 622 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 CD37P11049 281 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 ARSBP15848 533 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 COX7A1P24310 79 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 FPR2P25090 351 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 GLP1RP43220 463 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 PSMD7P51665 324 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 DLX6P56179 175 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 ERVFRD-1P60508 538 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 RPS27AP62979 156 aaKnown RBP9.71□□□□□ -0.86
HPS4-214ENST00000485842 UNC119Q13432 240 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 TIMM50Q3ZCQ8 353 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 NKAPLQ5M9Q1 402 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 RAB12Q6IQ22 244 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 OR51D1Q8NGF3 324 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 KCNG3Q8TAE7 436 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 SLC25A28Q96A46 364 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 FAM3DQ96BQ1 224 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 YIPF6Q96EC8 236 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 KCTD7Q96MP8 289 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 CENPOQ9BU64 300 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 IFT22Q9H7X7 185 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 SPACA1Q9HBV2 294 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 STEAP1Q9UHE8 339 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 KIF25Q9UIL4 384 aa9.71□□□□□ -0.86
HPS4-214ENST00000485842 SOX21Q9Y651 276 aaPredicted RBP9.71□□□□□ -0.86
HPS4-214ENST00000485842 ANK3Q12955 4377 aaKnown RBP9.71□□□□□ -0.86
HPS4-214ENST00000485842 MEIKINA0A087WXM9 373 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 A0A0B4J203 849 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 IGHV1-69DA0A0B4J2H0 117 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 MDFIC2A0A1B0GVS7 189 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A10PA6NDY2 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A18PA6NE21 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A16PA6NEW6 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A20PA6NIJ5 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A8PA6NJQ4 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A7PA6NKC0 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 IFITM5A6NNB3 132 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A22PA8MWA6 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 TMEM14DPA8MWL7 114 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A12PA8MX19 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A5PA8MXJ8 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A23PA8MXZ1 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 MCRIP1C9JLW8 97 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 AIREO43918 545 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 IGHV1-69P01742 117 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 CLEC2LP0C7M8 214 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A15PP0C7V4 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A13PP0C7W8 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A14PP0C7W9 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 FAM90A24PP0C7X0 464 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 SLC2A2P11168 524 aaPredicted RBP9.7□□□□□ -0.86
HPS4-214ENST00000485842 PRTN3P24158 256 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 KCNJ3P48549 501 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 LSM3P62310 102 aaKnown RBP9.7□□□□□ -0.86
HPS4-214ENST00000485842 SRSF2Q01130 221 aaKnown RBP9.7□□□□□ -0.86
HPS4-214ENST00000485842 MXD1Q05195 221 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 RSBN1Q5VWQ0 802 aaPredicted RBP9.7□□□□□ -0.86
HPS4-214ENST00000485842 NCR3LG1Q68D85 454 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 C1orf122Q6ZSJ8 110 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 OR2W3Q7Z3T1 314 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 NR2C2APQ86WQ0 139 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 PNKDQ8N490 385 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 ZNF418Q8TF45 676 aaPredicted RBP9.7□□□□□ -0.86
HPS4-214ENST00000485842 NICN1Q9BSH3 213 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 SUCNR1Q9BXA5 334 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 MRPS26Q9BYN8 205 aaKnown RBP9.7□□□□□ -0.86
HPS4-214ENST00000485842 BARHL1Q9BZE3 327 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 RCC2Q9P258 522 aaKnown RBP9.7□□□□□ -0.86
HPS4-214ENST00000485842 PEX16Q9Y5Y5 336 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 KIAA2026Q5HYC2 2103 aa9.7□□□□□ -0.86
HPS4-214ENST00000485842 TRAV39A0A0B4J263 110 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 TMEM30CPA0ZSE6 113 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 UBE2QL1A1L167 161 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 C17orf98A8MV24 154 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 TCF21O43680 179 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 PDCD6O75340 191 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 CLPXO76031 633 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 FUT3P21217 361 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 SDC2P34741 201 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 TGFBR1P36897 503 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 RANBP1P43487 201 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 QRFPP83859 136 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 RBM39Q14498 530 aaKnown RBP9.69□□□□□ -0.86
HPS4-214ENST00000485842 ZFHX3Q15911 3703 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 C2orf76Q3KRA6 126 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 PRAMEF5Q5TYX0 476 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 SIGIRRQ6IA17 410 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 TPRA1Q86W33 373 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 C11orf42Q8N5U0 333 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 SIGLECL1Q8N7X8 197 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 OR13A1Q8NGR1 328 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 MRGPRDQ8TDS7 321 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 DYRK2Q92630 601 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 TNFRSF14Q92956 283 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 CYYR1Q96J86 154 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 NEDD4LQ96PU5 975 aa9.69□□□□□ -0.86
HPS4-214ENST00000485842 URM1Q9BTM9 101 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms