RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 NPFFO15130 113 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 SLC22A1O15245 554 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 CRTAPO75718 401 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-214ENST00000482733 MGMTP16455 207 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 BAMBIQ13145 260 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 ATXN7L3Q14CW9 347 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-214ENST00000482733 TAF9Q16594 264 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 DEFB112Q30KQ8 113 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 SYT6Q5T7P8 510 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-214ENST00000482733 TCF23Q7RTU1 214 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 SUMF2Q8NBJ7 301 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 COQ2Q96H96 371 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 DPCDQ9BVM2 203 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-214ENST00000482733 VCX3AQ9NNX9 186 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 TAS2R3Q9NYW6 316 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 FAM96BQ9Y3D0 163 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 A0A087WXM4 84 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 CLDN34H7C241 214 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 HSPB6O14558 160 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 PDCD5O14737 125 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 MYL9P24844 172 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 GLIPR1P48060 266 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 KLRD1Q13241 179 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 MIDNQ504T8 468 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 ATAD3CQ5T2N8 411 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 ZDHHC22Q8N966 263 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 ZNF565Q8N9K5 539 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 TMEM104Q8NE00 496 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 OR13D1Q8NGV5 346 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 KCNG3Q8TAE7 436 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 SELENOIQ9C0D9 397 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 BANF2Q9H503 90 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 PLGRKTQ9HBL7 147 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 STUB1Q9UNE7 303 aa13.56□□□□□ -0.24
HMGN1-214ENST00000482733 AK6Q9Y3D8 172 aaKnown RBP13.56□□□□□ -0.24
HMGN1-214ENST00000482733 SOX21Q9Y651 276 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-214ENST00000482733 FBN1P35555 2871 aaKnown RBP13.56□□□□□ -0.24
HMGN1-214ENST00000482733 A0A0U1RQK1 487 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 SLC17A2O00624 439 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 CLPXO76031 633 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 BPNT1O95861 308 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 GLAP06280 429 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 FBP1P09467 338 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 IGHV1-8P0DP01 117 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 DLX1P56177 255 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 PRB3Q04118 309 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-214ENST00000482733 RBM39Q14498 530 aaKnown RBP13.55□□□□□ -0.24
HMGN1-214ENST00000482733 NEDD8Q15843 81 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 KRTAP24-1Q3LI83 254 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 HCP5Q6MZN7 132 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 Q6YL49 198 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 TSPAN14Q8NG11 270 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 FAM216AQ8WUB2 273 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 Q96M66 194 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 ESM1Q9NQ30 184 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 RCC2Q9P258 522 aaKnown RBP13.55□□□□□ -0.24
HMGN1-214ENST00000482733 SESN1Q9Y6P5 492 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 V9GY05 133 aa13.55□□□□□ -0.24
HMGN1-214ENST00000482733 MEIKINA0A087WXM9 373 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 MDFIC2A0A1B0GVS7 189 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 MEX3AA1L020 520 aaKnown RBP13.54□□□□□ -0.24
HMGN1-214ENST00000482733 MEIOCA2RUB1 952 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 DNAJC9-AS1A6NH13 148 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 ZNF729A6NN14 1252 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-214ENST00000482733 MCRIP1C9JLW8 97 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 MPIG6BO95866 241 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 VSIG8P0DPA2 414 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 FGF9P31371 208 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-214ENST00000482733 UBA52P62987 128 aaKnown RBP13.54□□□□□ -0.24
HMGN1-214ENST00000482733 SRSF2Q01130 221 aaKnown RBP13.54□□□□□ -0.24
HMGN1-214ENST00000482733 RAB11BQ15907 218 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 RSBN1Q5VWQ0 802 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-214ENST00000482733 SLC35E4Q6ICL7 350 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 OR52W1Q6IF63 320 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 HEPN1Q6WQI6 88 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 ZNF782Q6ZMW2 699 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-214ENST00000482733 TMEM86BQ8N661 226 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 NEK7Q8TDX7 302 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 FAM46BQ96A09 425 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 SLC25A28Q96A46 364 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 GFI1Q99684 422 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 MDFIQ99750 246 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 ZNF696Q9H7X3 374 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 ING3Q9NXR8 418 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 SSR3Q9UNL2 185 aa13.54□□□□□ -0.24
HMGN1-214ENST00000482733 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 TMEM30CPA0ZSE6 113 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 PAHP00439 452 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 ARSBP15848 533 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 FUT3P21217 361 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 COX7A1P24310 79 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 SAA4P35542 130 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 LGALS4P56470 323 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 RPS27AP62979 156 aaKnown RBP13.53□□□□□ -0.24
HMGN1-214ENST00000482733 SLC9A3R2Q15599 337 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 C22orf42Q6IC83 251 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 RAB12Q6IQ22 244 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms