RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TMEM31Q5JXX7 168 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 CDKL4Q5MAI5 379 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 CLVS2Q5SYC1 327 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 RESP18Q5W5W9 173 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 UGT2A3Q6UWM9 527 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 DCXRQ7Z4W1 244 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 KRTAP13-1Q8IUC0 172 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 OR8A1Q8NGG7 326 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 DOK4Q8TEW6 326 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 FMC1Q96HJ9 113 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 VAT1Q99536 393 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 SELENOSQ9BQE4 189 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 NXF2Q9GZY0 626 aaKnown RBP2.61□□□□□ -1.99
SF3B1-210ENST00000482158 RAB1BQ9H0U4 201 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 POMKQ9H5K3 350 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 MS4A12Q9NXJ0 267 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 CLEC2DQ9UHP7 191 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 POFUT2Q9Y2G5 429 aa2.61□□□□□ -1.99
SF3B1-210ENST00000482158 PLB1Q6P1J6 1458 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 RBFOX3A6NFN3 312 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 ITGB1BP1O14713 200 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 ENSAO43768 121 aaKnown RBP2.6□□□□□ -1.99
SF3B1-210ENST00000482158 SLC37A4O43826 429 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 COX7A2P2O60397 106 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 IL12BP29460 328 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 KCNJ3P48549 501 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 HSPA13P48723 471 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 PMS2P3Q13401 168 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 KRTAP25-1Q3LHN0 102 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 AMMECR1LQ6DCA0 310 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 GLYATQ6IB77 296 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 PLCZ1Q86YW0 608 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 RBM45Q8IUH3 476 aaKnown RBP2.6□□□□□ -1.99
SF3B1-210ENST00000482158 AMN1Q8IY45 258 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 ZFP82Q8N141 532 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 OPTNQ96CV9 577 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 DSN1Q9H410 356 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 GOLPH3Q9H4A6 298 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 DUSP21Q9H596 190 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 PAQR5Q9NXK6 330 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF230Q9UIE0 474 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-210ENST00000482158 SCML1Q9UN30 329 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 PSMD13Q9UNM6 376 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 SMARCA2P51531 1590 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 ZBED9Q6R2W3 1325 aa2.6□□□□□ -1.99
SF3B1-210ENST00000482158 SSH2Q76I76 1423 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF407Q9C0G0 2248 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 IGHV3-43A0A0B4J1X8 118 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 UPK2O00526 184 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 TOR1AO14656 332 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 COCHO43405 550 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 BRI3O95415 125 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 CGB3P0DN86 165 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 CGB7P0DN87 165 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 PTHLHP12272 177 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 MLNP12872 115 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 CDC34P49427 236 aaPredicted RBP2.59□□□□□ -1.99
SF3B1-210ENST00000482158 GTF2A1P52655 376 aaPredicted RBP2.59□□□□□ -1.99
SF3B1-210ENST00000482158 FOXA1P55317 472 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 UBE2G2P60604 165 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 STX4Q12846 297 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 STX3Q13277 289 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 SLAMF1Q13291 335 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 PSG3Q16557 428 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 TTMPQ5BVD1 217 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 PAGE2Q7Z2X7 111 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 GALNT10Q86SR1 603 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 AKAP14Q86UN6 197 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 C17orf78Q8N4C9 275 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 BLNKQ8WV28 456 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 SLC35B4Q969S0 331 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 CPB2Q96IY4 423 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 PKMYT1Q99640 499 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF436Q9C0F3 470 aaPredicted RBP2.59□□□□□ -1.99
SF3B1-210ENST00000482158 DERL2Q9GZP9 239 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 ASF1BQ9NVP2 202 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF586Q9NXT0 402 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 ZNF780BQ9Y6R6 833 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 ICOSQ9Y6W8 199 aa2.59□□□□□ -1.99
SF3B1-210ENST00000482158 RAD50Q92878 1312 aa2.59□□□□□ -2
SF3B1-210ENST00000482158 ANKRD30AQ9BXX3 1397 aa2.59□□□□□ -2
SF3B1-210ENST00000482158 RAB19A4D1S5 217 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 MGAT4DA6NG13 374 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 H3BQV1 296 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 NSA2O95478 260 aaKnown RBP2.58□□□□□ -2
SF3B1-210ENST00000482158 CPSF4O95639 269 aaKnown RBP2.58□□□□□ -2
SF3B1-210ENST00000482158 IGKV1D-33P01593 117 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 IGKV1-33P01594 117 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 IGKV5-2P06315 115 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 TGFBR2P37173 567 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 XKP51811 444 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 EMP2P54851 167 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 MOGQ16653 247 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 DNAL1Q4LDG9 190 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 ACTBL2Q562R1 376 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 HCP5Q6MZN7 132 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 ZNF773Q6PK81 442 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 OR2M3Q8NG83 312 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 ACTL9Q8TC94 416 aa2.58□□□□□ -2
SF3B1-210ENST00000482158 CCDC127Q96BQ5 260 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms