RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ATG2AQ2TAZ0 1938 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 A0A0C4DFX4 3053 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 ARHGAP21Q5T5U3 1957 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 KIAA1549LQ6ZVL6 1849 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 COL6A3P12111 3177 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 XKRY2A2RUG3 117 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 INS-IGF2F8WCM5 200 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 M0QX08 132 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 TPST1O60507 370 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 ALOX12BO75342 701 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 GCM2O75603 506 aaPredicted RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 SERPINB7O75635 380 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 TNFSF15O95150 251 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 H6PDO95479 791 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 PRB2P02812 416 aaPredicted RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 OPN1SWP03999 348 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 FABP3P05413 133 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 BCHEP06276 602 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 TFPTP0C1Z6 253 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 ZNF24P17028 368 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 PPICP45877 212 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 SSR4P51571 173 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 RPS15P62841 145 aaKnown RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 SELENOWP63302 87 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 HPCAP84074 193 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 GINS1Q14691 196 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 NCF4Q15080 339 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CCNJQ5T5M9 372 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 HES5Q5TA89 166 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 ZNF691Q5VV52 312 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 EIF3MQ7L2H7 374 aaKnown RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 OLIG3Q7RTU3 272 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 VTCN1Q7Z7D3 282 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 HMGN2P46Q86SG4 172 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 GALNT10Q86SR1 603 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CDH26Q8IXH8 852 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 FAM86B1Q8N7N1 296 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 ZNF321PQ8N8H1 164 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 ZNF615Q8N8J6 731 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CYB561D1Q8N8Q1 229 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 COX18Q8N8Q8 333 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CDRT4Q8N9R6 151 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 HSD17B11Q8NBQ5 300 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 MORN4Q8NDC4 146 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 OR52E4Q8NGH9 312 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 OR5D16Q8NGK9 328 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 OR1S2Q8NGQ3 325 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CANT1Q8WVQ1 401 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 LZICQ8WZA0 190 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CDS1Q92903 461 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 TAMM41Q96BW9 452 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 RASD2Q96D21 266 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 DUS3LQ96G46 650 aaKnown RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 RMND5BQ96G75 393 aaPredicted RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 PYURFQ96I23 114 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 COL21A1Q96P44 957 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 STACQ99469 402 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 ATP5SQ99766 215 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 DOHHQ9BU89 302 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 NUDT9Q9BW91 350 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 PIGUQ9H490 435 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 TRIM45Q9H8W5 580 aaPredicted RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 WDR54Q9H977 334 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 NOX3Q9HBY0 568 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 BCL2L10Q9HD36 194 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CYTL1Q9NRR1 136 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 ARMC1Q9NVT9 282 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 STX18Q9P2W9 335 aaKnown RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 ING4Q9UNL4 249 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CFL2Q9Y281 166 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 FARSAQ9Y285 508 aaKnown RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 GOLT1BQ9Y3E0 138 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 CSDC2Q9Y534 153 aaKnown RBP2.36□□□□□ -2.03
CBX3-207ENST00000481300 KCNE3Q9Y6H6 103 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 V9GYQ6 96 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 NACAE9PAV3 2078 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 NUMA1Q14980 2115 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 VCANP13611 3396 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 SHROOM3Q8TF72 1996 aa2.36□□□□□ -2.03
CBX3-207ENST00000481300 PLXNA2O75051 1894 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 CACNA1HO95180 2353 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 DENND4CQ5VZ89 1909 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 IGKV2-28A0A075B6P5 120 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 IGHV3-66A0A0C4DH42 116 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 TRBV11-1A0A0K0K1C0 115 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 SMCO3A2RU48 225 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 C21orf140B9A014 251 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 hCG_2039718K7EN88 272 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 GNGT2O14610 69 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 ACOX3O15254 700 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 CLOCKO15516 846 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 AIREO43918 545 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 RAD1O60671 282 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 E2F6O75461 281 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 REM1O75628 298 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 KLF7O75840 302 aaPredicted RBP2.35□□□□□ -2.03
CBX3-207ENST00000481300 KCNK2O95069 426 aa2.35□□□□□ -2.03
CBX3-207ENST00000481300 UTS2O95399 124 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms