RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CHST1O43916 411 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 IGKV1D-12P01611 117 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 IGLV1-47P01700 117 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 OPN1MWP04001 364 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 OPN1MW2P0DN77 364 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 OPN1MW3P0DN78 364 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 VSIG10L2P0DP72 767 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 GTF2F2P13984 249 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 FSTP19883 344 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 GZMHP20718 246 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 BDKRB2P30411 391 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 RANBP1P43487 201 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 VDAC2P45880 294 aaPredicted RBP9.23□□□□□ -0.93
CCM2-213ENST00000480658 DEFA6Q01524 100 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 SRSF4Q08170 494 aaKnown RBP9.23□□□□□ -0.93
CCM2-213ENST00000480658 RBM39Q14498 530 aaKnown RBP9.23□□□□□ -0.93
CCM2-213ENST00000480658 ATXN7L3Q14CW9 347 aaPredicted RBP9.23□□□□□ -0.93
CCM2-213ENST00000480658 HLA-DRB5Q30154 266 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 Q3ZCU0 254 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 PDLIM3Q53GG5 364 aaPredicted RBP9.23□□□□□ -0.93
CCM2-213ENST00000480658 DDI2Q5TDH0 399 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 ASCL4Q6XD76 172 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 SATL1Q86VE3 508 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 C8orf59Q8N0T1 100 aaPredicted RBP9.23□□□□□ -0.93
CCM2-213ENST00000480658 OSR2Q8N2R0 312 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 STX19Q8N4C7 294 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 TPRX1Q8N7U7 411 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 NKAIN3Q8N8D7 197 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 CNIH3Q8TBE1 160 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 SPACA5Q96QH8 159 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 MMP28Q9H239 520 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 LINC00574Q9H8X3 128 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 HILPDAQ9Y5L2 63 aa9.23□□□□□ -0.93
CCM2-213ENST00000480658 PKD1L1Q8TDX9 2849 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 MEIKINA0A087WXM9 373 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 ERICH4A6NGS2 130 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 BUB1B-PAK6H3BSN5 160 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 GABRPO00591 440 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 OGG1O15527 345 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 WIPF1O43516 503 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 CA11O75493 328 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 WBP4O75554 376 aaKnown RBP9.22□□□□□ -0.93
CCM2-213ENST00000480658 OR2F2O95006 317 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 IL1AP01583 271 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 CD1AP06126 327 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 GLP1RP43220 463 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 GLIPR1P48060 266 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 RAB7AP51149 207 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 KRTAP10-3P60369 221 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 MADCAM1Q13477 382 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 PLA1AQ53H76 456 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 PRAMEF5Q5TYX0 476 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 Q6P435 159 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 TRAT1Q6PIZ9 186 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 REC114Q7Z4M0 266 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 RPEQ96AT9 228 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 ZNF702PQ9H963 129 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 TAS2R4Q9NYW5 299 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 FOXJ3Q9UPW0 622 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 ST3GAL6Q9Y274 331 aa9.22□□□□□ -0.93
CCM2-213ENST00000480658 TMEM30CPA0ZSE6 113 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A10PA6NDY2 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A18PA6NE21 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A16PA6NEW6 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A20PA6NIJ5 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A7PA6NKC0 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A12PA8MX19 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A5PA8MXJ8 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A23PA8MXZ1 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 E9PI62 339 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 TXNL1O43396 289 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 GPX5O75715 221 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 OR7C1O76099 320 aaPredicted RBP9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A15PP0C7V4 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A13PP0C7W8 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A14PP0C7W9 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A24PP0C7X0 464 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 IL3RAP26951 378 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 CAPGP40121 348 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 SOX2P48431 317 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 ETV1P50549 477 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 RBM11P57052 281 aaKnown RBP9.21□□□□□ -0.94
CCM2-213ENST00000480658 THNSL2Q86YJ6 484 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 OR8H3Q8N146 312 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 OR4X2Q8NGF9 303 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 OR52M1Q8NGK5 317 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 GHSRQ92847 366 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 TOMM40LQ969M1 308 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 COQ2Q96H96 371 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 DPCDQ9BVM2 203 aaPredicted RBP9.21□□□□□ -0.94
CCM2-213ENST00000480658 CALYQ9NYX4 217 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 IDI2-AS1Q9NZ38 188 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 GHRLQ9UBU3 117 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 ERGIC3Q9Y282 383 aa9.21□□□□□ -0.94
CCM2-213ENST00000480658 TET2Q6N021 2002 aaPredicted RBP9.21□□□□□ -0.94
CCM2-213ENST00000480658 HTR3BO95264 441 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 CLIC3O95833 236 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 TSPAN15O95858 294 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 SLC6A1P30531 599 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 GTF2A1P52655 376 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms