RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ARL11Q969Q4 196 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 CABLES2Q9BTV7 478 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 TUBG2Q9NRH3 451 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 LPAR3Q9UBY5 353 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 AMDHD2Q9Y303 409 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 LGALS8O00214 317 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 KCNAB3O43448 404 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 TK1P04183 234 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 TAGLNQ01995 201 aaKnown RBP10.43□□□□□ -0.74
PTPRF-212ENST00000477970 TGFBR3Q03167 851 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 C10orf91Q5T1B1 145 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 INO80CQ6PI98 192 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-212ENST00000477970 GAPTQ8N292 157 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 UBAC2Q8NBM4 344 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 OR4D5Q8NGN0 318 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 OR1S2Q8NGQ3 325 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 TMEM222Q9H0R3 208 aa10.43□□□□□ -0.74
PTPRF-212ENST00000477970 C3orf85A0A1B0GTC6 90 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 FAM221AA4D161 298 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 LRP5LA4QPB2 252 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 MBPP02686 304 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-212ENST00000477970 SELEP16581 610 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 GABRA6Q16445 453 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 OR4A4PQ8NGN8 299 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 MRPL30Q8TCC3 161 aaKnown RBP10.42□□□□□ -0.74
PTPRF-212ENST00000477970 RTL8AQ9BWD3 113 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 C12orf49Q9H741 205 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 KMT2BQ9UMN6 2715 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-212ENST00000477970 GPR31O00270 319 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 GPR137BO60478 399 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 SMPD2O60906 423 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 IL32P24001 234 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 GNRHRP30968 328 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 SULT1A2P50226 295 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 FXYD4P59646 89 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 IGSF11Q5DX21 431 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 MOB1BQ7L9L4 216 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 FAM58AQ8N1B3 248 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 SUMF2Q8NBJ7 301 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 C11orf1Q9H5F2 150 aa10.42□□□□□ -0.74
PTPRF-212ENST00000477970 SYNGR1O43759 233 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 ERVK11-1P61568 191 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 MST1LQ2TV78 715 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 Q6ZT83 130 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 BPIFCQ8NFQ6 507 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 HS3ST6Q96QI5 342 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 TAF9BQ9HBM6 251 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 ZNF629Q9UEG4 869 aaPredicted RBP10.41□□□□□ -0.74
PTPRF-212ENST00000477970 TMA7Q9Y2S6 64 aaKnown RBP10.41□□□□□ -0.74
PTPRF-212ENST00000477970 POMT1Q9Y6A1 747 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 AKAP13Q12802 2813 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 IQCF6A8MYZ5 107 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 CEACAM4O75871 244 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 RAC2P15153 192 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 PRKACAP17612 351 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 COX5AP20674 150 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 IGHV1-2P23083 117 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 HERPUD1Q15011 391 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 HAGHLQ6PII5 290 aaPredicted RBP10.41□□□□□ -0.74
PTPRF-212ENST00000477970 FAM214BQ7L5A3 538 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 P4HA3Q7Z4N8 544 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 LYZL2Q7Z4W2 148 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 NAXEQ8NCW5 288 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 MICU1Q9BPX6 476 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 SPEF1Q9Y4P9 236 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 TMEM210A6NLX4 147 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 PDCD1Q15116 288 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 PHLDA2Q53GA4 152 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 Q6P435 159 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 TMED6Q8WW62 240 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 ASF1BQ9NVP2 202 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
PTPRF-212ENST00000477970 NCOR2Q9Y618 2525 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 TRAV24A0A0B4J272 114 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 TRAV17A0A0B4J275 112 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 LOC105371267A0A1B0GV96 52 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 DEGS1O15121 323 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 PHF1O43189 567 aaPredicted RBP10.4□□□□□ -0.74
PTPRF-212ENST00000477970 LHFPL5Q8TAF8 219 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 TP53RKQ96S44 253 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 SPIN2AQ99865 258 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 SPIN2BQ9BPZ2 258 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 PARP11Q9NR21 331 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 ST8SIA3O43173 380 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 MMP9P14780 707 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 UCP1P25874 307 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 UCNP55089 124 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 BLOC1S1P78537 153 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 HLA-DRB3P79483 266 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 RPL7L1Q6DKI1 246 aaKnown RBP10.4□□□□□ -0.74
PTPRF-212ENST00000477970 OR2A2Q6IF42 318 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 PCSK4Q6UW60 755 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 WNT2BQ93097 391 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 FBXL17Q9UF56 701 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 MED13Q9UHV7 2174 aa10.4□□□□□ -0.74
PTPRF-212ENST00000477970 TMEM218A2RU14 115 aa10.4□□□□□ -0.75
PTPRF-212ENST00000477970 LILRA1O75019 489 aa10.4□□□□□ -0.75
PTPRF-212ENST00000477970 TMEM33P57088 247 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms