RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 PRRC2BQ5JSZ5 2229 aaKnown RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 PBRM1Q86U86 1689 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 MPDZO75970 2070 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 IGLV10-54A0A075B6I4 117 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 IGHV2OR16-5A0A0B4J2B6 119 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 GSTTP1A0A1W2PQM5 241 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 RAB19A4D1S5 217 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 FABP12A6NFH5 140 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 GOLGA6L10A6NI86 522 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 ARGFXA6NJG6 315 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 IGLL5B9A064 214 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 F8VP50 259 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 RGS5O15539 181 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 ATP8B1O43520 1251 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 GATCO43716 136 aaKnown RBP1.29□□□□□ -2.2
VPS50-213ENST00000477572 PSIP1O75475 530 aaKnown RBP1.29□□□□□ -2.2
VPS50-213ENST00000477572 ADAP1O75689 374 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 RPP14O95059 124 aaKnown RBP1.29□□□□□ -2.2
VPS50-213ENST00000477572 LYPLA2O95372 231 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 AHSA1O95433 338 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 APOEP02649 317 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 TRGV3P03979 118 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 IFNA6P05013 189 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 HMGN1P05114 100 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 KRT7P08729 469 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 CTXN2P0C2S0 81 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 CCNOP22674 350 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 SLC6A1P30531 599 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 NUDT2P50583 147 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 EMP2P54851 167 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 OR2B6P58173 313 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 RPL10AP62906 217 aaKnown RBP1.29□□□□□ -2.2
VPS50-213ENST00000477572 ST3GAL4Q11206 333 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 SLAMF1Q13291 335 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 SPCS2Q15005 226 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 PDK2Q15119 407 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 ELOCQ15369 112 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 C18orf21Q32NC0 220 aaPredicted RBP1.29□□□□□ -2.2
VPS50-213ENST00000477572 CCDC153Q494R4 210 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 COQ5Q5HYK3 327 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 TTC32Q5I0X7 151 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 DUPD1Q68J44 220 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 EPGNQ6UW88 154 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 ASCL4Q6XD76 172 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 CCDC121Q6ZUS5 278 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 BOD1L2Q8IYS8 172 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 CYP4Z2PQ8N1L4 340 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 PROKR2Q8NFJ6 384 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 OR51L1Q8NGJ5 315 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 OR5D18Q8NGL1 313 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 DTD1Q8TEA8 209 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 TFGQ92734 400 aaPredicted RBP1.29□□□□□ -2.2
VPS50-213ENST00000477572 CPB2Q96IY4 423 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 SMIM8Q96KF7 97 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 CEP19Q96LK0 163 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 IMP3Q9NV31 184 aaKnown RBP1.29□□□□□ -2.2
VPS50-213ENST00000477572 NLE1Q9NVX2 485 aaPredicted RBP1.29□□□□□ -2.2
VPS50-213ENST00000477572 CYB5R1Q9UHQ9 305 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 PSMD13Q9UNM6 376 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 KLF12Q9Y4X4 402 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 ICE1Q9Y2F5 2266 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 SPATA31E1Q6ZUB1 1445 aa1.29□□□□□ -2.2
VPS50-213ENST00000477572 A0A0B4J2C4 111 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 D6RAR5 112 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 KLRC4-KLRK1H3BQV0 150 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 TOX3O15405 576 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 DENRO43583 198 aaKnown RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 NDUFA2O43678 99 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 SYNGR2O43760 224 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 STX10O60499 249 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 KLK1P06870 262 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 RHOCP08134 193 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 SERPINA6P08185 405 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 TFPTP0C1Z6 253 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 OR4E1P0C645 316 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 GIMD1P0DJR0 217 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 PSKH1P11801 424 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 ZNF7P17097 686 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 S100A1P23297 94 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 TEAD1P28347 426 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 HSD11B1P28845 292 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 CFHR2P36980 270 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 ACTR1BP42025 376 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 CAPZBP47756 277 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 KCNJ3P48549 501 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 HCCSP53701 268 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 FOXA1P55317 472 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 AP3S2P59780 193 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 CXCR4P61073 352 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 REEP5Q00765 189 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 TSPAN31Q12999 210 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 UAP1Q16222 522 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 EXOC3L4Q17RC7 722 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 GOLGA7BQ2TAP0 167 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 LGALSLQ3ZCW2 172 aaPredicted RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 ZCWPW2Q504Y3 356 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 MRPL2Q5T653 305 aaKnown RBP1.28□□□□□ -2.2
VPS50-213ENST00000477572 KCTD16Q68DU8 428 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 SPOPLQ6IQ16 392 aa1.28□□□□□ -2.2
VPS50-213ENST00000477572 ULK3Q6PHR2 472 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms