RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 A0A1W2PQ09 198 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 FOXI3A8MTJ6 420 aaPredicted RBP13.05□□□□□ -0.32
COPS3-207ENST00000477299 MGST3O14880 152 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 GPR37O15354 613 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 IL1AP01583 271 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 MMP9P14780 707 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 CHATP28329 748 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 DLX6P56179 175 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 MPV17LQ2QL34 196 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 KLF17Q5JT82 389 aaPredicted RBP13.05□□□□□ -0.32
COPS3-207ENST00000477299 NKAPLQ5M9Q1 402 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 RSBN1Q5VWQ0 802 aaPredicted RBP13.05□□□□□ -0.32
COPS3-207ENST00000477299 OLFML2AQ68BL7 652 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 FAM89BQ8N5H3 189 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 CHST4Q8NCG5 386 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 OR5D13Q8NGL4 314 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 FAAP24Q9BTP7 215 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 DCSTAMPQ9H295 470 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 ONECUT1Q9UBC0 465 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 FBLN5Q9UBX5 448 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 KIF25Q9UIL4 384 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 RAB22AQ9UL26 194 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 AUP1Q9Y679 476 aa13.05□□□□□ -0.32
COPS3-207ENST00000477299 MMP23AO75900 390 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 LIPFP07098 398 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 FUT3P21217 361 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 BLVRBP30043 206 aaPredicted RBP13.04□□□□□ -0.32
COPS3-207ENST00000477299 P2RX3P56373 397 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 PLAC9Q5JTB6 97 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 KRBOX4Q5JUW0 171 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 UTF1Q5T230 341 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 BTNL3Q6UXE8 466 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 LINC00596Q86U02 117 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 PDZD9Q8IXQ8 264 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 DTX3Q8N9I9 347 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 CCDC107Q8WV48 283 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 SLC25A46Q96AG3 418 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 PCGF1Q9BSM1 259 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 SIRT7Q9NRC8 400 aa13.04□□□□□ -0.32
COPS3-207ENST00000477299 TRBV23-1A0A0A0MS06 115 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 ODAMA1E959 279 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A10PA6NDY2 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A18PA6NE21 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A16PA6NEW6 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A20PA6NIJ5 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A8PA6NJQ4 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A7PA6NKC0 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A22PA8MWA6 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A12PA8MX19 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A5PA8MXJ8 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A23PA8MXZ1 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 PDCD6O75340 191 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A15PP0C7V4 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A13PP0C7W8 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A14PP0C7W9 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 FAM90A24PP0C7X0 464 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 IGHV4-38-2P0DP08 117 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 GDNFP39905 211 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 TMBIM6P55061 237 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 KLRD1Q13241 179 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 BAIAP2L2Q6UXY1 529 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 Q6ZPA2 131 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 OR13A1Q8NGR1 328 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 UBALD1Q8TB05 177 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 NEK7Q8TDX7 302 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 ISOC1Q96CN7 298 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 SLC25A38Q96DW6 304 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 ARHGAP5-AS1Q96IT6 56 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 WDFY2Q96P53 400 aa13.03□□□□□ -0.32
COPS3-207ENST00000477299 RBM38Q9H0Z9 239 aaKnown RBP13.03□□□□□ -0.32
COPS3-207ENST00000477299 ELF5Q9UKW6 265 aaPredicted RBP13.03□□□□□ -0.32
COPS3-207ENST00000477299 MCRIP1C9JLW8 97 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 H3BMQ9 156 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 RAB27BO00194 218 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 TOX4O94842 621 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 MT-ND4P03905 459 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 CSN2P05814 226 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 CGB3P0DN86 165 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 CGB7P0DN87 165 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 ERP29P30040 261 aaKnown RBP13.02□□□□□ -0.33
COPS3-207ENST00000477299 RIPPLY3P57055 190 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 BLMHQ13867 455 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 VMO1Q7Z5L0 202 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 OR4K15Q8NH41 348 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 PPP1R35Q8TAP8 253 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
COPS3-207ENST00000477299 URM1Q9BTM9 101 aaKnown RBP13.02□□□□□ -0.33
COPS3-207ENST00000477299 PECRQ9BY49 303 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 ZMAT3Q9HA38 289 aaKnown RBP13.02□□□□□ -0.33
COPS3-207ENST00000477299 KCNK7Q9Y2U2 307 aa13.02□□□□□ -0.33
COPS3-207ENST00000477299 A0A075B6Q4 140 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 MEIKINA0A087WXM9 373 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 A0A1W2PRD5 423 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 A0A1W2PRF3 423 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 A0A1W2PRM7 423 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 J3QLI3 93 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 FSHBP01225 129 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 RAB6AP20340 208 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 GATA3P23771 443 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms