RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TRAV8-7A0A075B6U6 113 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 TRBV5-7A0A0A0MS05 114 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 ODF3BA8MYP8 253 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 GPX5O75715 221 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 SERPINA2P20848 420 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 GLIPR1P48060 266 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 ZNF626Q68DY1 528 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 C11orf88Q6PI97 169 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 ASCL4Q6XD76 172 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 OSR2Q8N2R0 312 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 JAGN1Q8N5M9 183 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 OR11H6Q8NGC7 330 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 DERL3Q96Q80 235 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 CLEC7AQ9BXN2 247 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 ANKRD60Q9BZ19 345 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 TMEM133Q9H2Q1 129 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 RAB18Q9NP72 206 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 TAS2R3Q9NYW6 316 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 FBLN5Q9UBX5 448 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 FOXJ3Q9UPW0 622 aa13.12□□□□□ -0.31
COL1A1-205ENST00000476387 IGHV2-26A0A0B4J1V2 119 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 ZNF780AO75290 641 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-205ENST00000476387 GABRA5P31644 462 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 GLP1RP43220 463 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 RBM11P57052 281 aaKnown RBP13.11□□□□□ -0.31
COL1A1-205ENST00000476387 SLC35A2P78381 396 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 MED22Q15528 200 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 LY6EQ16553 131 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 PRAMEF5Q5TYX0 476 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 SLC35E4Q6ICL7 350 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 OR52W1Q6IF63 320 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 LHFPL4Q7Z7J7 247 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 LINC00596Q86U02 117 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 Q8NFD4 153 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 COQ2Q96H96 371 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 OR6C3Q9NZP0 311 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 ST3GAL6Q9Y274 331 aa13.11□□□□□ -0.31
COL1A1-205ENST00000476387 OR7C1O76099 320 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-205ENST00000476387 MAS1P04201 325 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 CDK2P24941 298 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 PAX6P26367 422 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 KCNJ3P48549 501 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 DOC2BQ14184 412 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 GPR176Q14439 515 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 SPHARQ15513 63 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 C2orf68Q2NKX9 166 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 SLC22A6Q4U2R8 563 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 PLA1AQ53H76 456 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 NHLRC3Q5JS37 347 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 HEPN1Q6WQI6 88 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 LIAT1Q6ZQX7 453 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 MS4A15Q8N5U1 240 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 NKAIN3Q8N8D7 197 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 DTX3Q8N9I9 347 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 OR4D6Q8NGJ1 314 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 NDNFQ8TB73 568 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 CORO2AQ92828 525 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 OR5M11Q96RB7 305 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 BARHL1Q9BZE3 327 aa13.1□□□□□ -0.31
COL1A1-205ENST00000476387 PPIL3Q9H2H8 161 aaKnown RBP13.1□□□□□ -0.31
COL1A1-205ENST00000476387 RANBP3Q9H6Z4 567 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-205ENST00000476387 MRPS28Q9Y2Q9 187 aaKnown RBP13.1□□□□□ -0.31
COL1A1-205ENST00000476387 MEIKINA0A087WXM9 373 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 TRAV24A0A0B4J272 114 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 FAM90A8PA6NJQ4 464 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 ZNF729A6NN14 1252 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-205ENST00000476387 RGS10O43665 173 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 GTF2F2P13984 249 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 KIR2DS4P43632 304 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 FAM189A2Q15884 450 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 SSX2Q16385 188 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 MINOS1Q5TGZ0 78 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 AWAT2Q6E213 333 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 OR4C13Q8NGP0 309 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 SGCDQ92629 289 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 UFD1Q92890 307 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 MUL1Q969V5 352 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 MALSU1Q96EH3 234 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 TMED9Q9BVK6 235 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 CCDC90BQ9GZT6 254 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 KIF25Q9UIL4 384 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 LSM2Q9Y333 95 aaKnown RBP13.09□□□□□ -0.31
COL1A1-205ENST00000476387 MINOS1-NBL1R4GNA1 71 aa13.09□□□□□ -0.31
COL1A1-205ENST00000476387 VGLL3A8MV65 326 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 GEMIN2O14893 280 aaKnown RBP13.08□□□□□ -0.32
COL1A1-205ENST00000476387 MMP23AO75900 390 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 TSPAN15O95858 294 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 EFNB2P52799 333 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 HERPUD1Q15011 391 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 MPV17LQ2QL34 196 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 GLIPR1L1Q6UWM5 242 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 RTN4RL2Q86UN3 420 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 CDH26Q8IXH8 852 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 ZNF565Q8N9K5 539 aa13.08□□□□□ -0.32
COL1A1-205ENST00000476387 SUMF2Q8NBJ7 301 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms