RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 NRIP2Q9BQI9 281 aa15.24■□□□□ 0.03
ATG4B-217ENST00000475693 TM2D1Q9BX74 207 aa15.24■□□□□ 0.03
ATG4B-217ENST00000475693 TLNRD1Q9H1K6 362 aa15.24■□□□□ 0.03
ATG4B-217ENST00000475693 LAMP3Q9UQV4 416 aa15.24■□□□□ 0.03
ATG4B-217ENST00000475693 NOP16Q9Y3C1 178 aaKnown RBP15.24■□□□□ 0.03
ATG4B-217ENST00000475693 FAM221AA4D161 298 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 MFSD2BA6NFX1 497 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 VSTM5A8MXK1 200 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 MCRIP1C9JLW8 97 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 NXPH2O95156 264 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 FGF12P61328 243 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 ERVK11-1P61568 191 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 FBXW5Q969U6 566 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 REG4Q9BYZ8 158 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 OR14J1Q9UGF5 321 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 GLS2Q9UI32 602 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 PRELID1Q9Y255 219 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 SESN1Q9Y6P5 492 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 DOPEY2Q9Y3R5 2298 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 UBE2QL1A1L167 161 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 B9A039 149 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 KRBOX1C9JBD0 128 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 HS3ST1O14792 307 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 SCO1O75880 301 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 FAUP35544 74 aaKnown RBP15.23■□□□□ 0.03
ATG4B-217ENST00000475693 SAXO1Q8IYX7 474 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 GVQW1Q8N7I0 195 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 OR56B1Q8NGI3 324 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 MAFIPQ8WZ33 124 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 PECRQ9BY49 303 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 BEX1Q9HBH7 125 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 ZDHHC8Q9ULC8 765 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 DYSFO75923 2080 aa15.23■□□□□ 0.03
ATG4B-217ENST00000475693 PTBP3O95758 552 aaKnown RBP15.22■□□□□ 0.03
ATG4B-217ENST00000475693 CXCL2P19875 107 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 CPT2P23786 658 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 CAPZA1P52907 286 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 ELP2Q6IA86 826 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 OVCH2Q7RTZ1 564 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 GCSAMQ8N6F7 178 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 SULT4A1Q9BR01 284 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 TAS2R8Q9NYW2 309 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 IL19Q9UHD0 177 aa15.22■□□□□ 0.03
ATG4B-217ENST00000475693 ZNF230Q9UIE0 474 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-217ENST00000475693 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-217ENST00000475693 GLRA1P23415 457 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 EFNB3Q15768 340 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 C5orf24Q7Z6I8 188 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 Q8NFD4 153 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 RDH5Q92781 318 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 PLEKHJ1Q9NW61 149 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 SDHAF2Q9NX18 166 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 POLDIP2Q9Y2S7 368 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 CSMD1Q96PZ7 3565 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 SSX5O60225 188 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 HIST1H1DP16402 221 aaKnown RBP15.21■□□□□ 0.03
ATG4B-217ENST00000475693 CTRB1P17538 263 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 CTRB2Q6GPI1 263 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 FAAP20Q6NZ36 180 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 DEFB108BQ8NET1 73 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 SCARB1Q8WTV0 552 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 SEC22CQ9BRL7 303 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 DECR2Q9NUI1 292 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 METRNQ9UJH8 293 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 PPP1R3CQ9UQK1 317 aa15.21■□□□□ 0.03
ATG4B-217ENST00000475693 J3QKU1 62 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 SIRPB1O00241 398 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 CHRM2P08172 466 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 DANCRP0C864 163 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 S100A11P31949 105 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 CD80P33681 288 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 PRSS3P35030 304 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 RBMS2Q15434 407 aaKnown RBP15.2■□□□□ 0.02
ATG4B-217ENST00000475693 SP5Q6BEB4 398 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-217ENST00000475693 POC1AQ8NBT0 407 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 CCL17Q92583 94 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 SAP30LQ9HAJ7 183 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 ZNF69Q9UC07 566 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 MFNGO00587 321 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 CHATP28329 748 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 CDKN1AP38936 164 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 SEC61A1P61619 476 aaKnown RBP15.2■□□□□ 0.02
ATG4B-217ENST00000475693 RAB12Q6IQ22 244 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 EIF4E3Q8N5X7 224 aaKnown RBP15.2■□□□□ 0.02
ATG4B-217ENST00000475693 OR4S1Q8NGB4 309 aa15.2■□□□□ 0.02
ATG4B-217ENST00000475693 KLF2Q9Y5W3 355 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-217ENST00000475693 MEX3AA1L020 520 aaKnown RBP15.19■□□□□ 0.02
ATG4B-217ENST00000475693 A8MXK9 166 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 H7C417 338 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 TRIM77I1YAP6 450 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 NDUFS7O75251 213 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 NMBP08949 121 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 TNFSF4P23510 183 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 ACP7Q6ZNF0 438 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 CHIAQ9BZP6 476 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 SHARPINQ9H0F6 387 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 FN3KRPQ9HA64 309 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 MTFP1Q9UDX5 166 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 OPN4Q9UHM6 478 aa15.19■□□□□ 0.02
ATG4B-217ENST00000475693 AK3Q9UIJ7 227 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms