RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 GLS2Q9UI32 602 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 SIRT4Q9Y6E7 314 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-207ENST00000475549 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
HDAC3-207ENST00000475549 TCRBV4S1A1TA0A5B7 111 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 LINC01548A6NM66 108 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 NPIPB11E5RHQ5 1161 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 H0YJX3 145 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 K7EIL1 84 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 GABRPO00591 440 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 PIN1P1O15428 100 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 SULT1B1O43704 296 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 PEX14O75381 377 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 WBP4O75554 376 aaKnown RBP5.57□□□□□ -1.52
HDAC3-207ENST00000475549 LIMS3P0CW19 117 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 LIMS4P0CW20 117 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 PTGFRP43088 359 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 MTNR1BP49286 362 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 SMN1Q16637 294 aaKnown RBP5.57□□□□□ -1.52
HDAC3-207ENST00000475549 ZSCAN26Q16670 478 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 PIGYQ3MUY2 71 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 C4orf48Q5BLP8 95 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF691Q5VV52 312 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 RSBN1Q5VWQ0 802 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-207ENST00000475549 LPCAT4Q643R3 524 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 C18orf65Q6ZTR6 163 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 REC114Q7Z4M0 266 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 THNSL2Q86YJ6 484 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 PXT1Q8NFP0 134 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 OR52I1Q8NGK6 324 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 OR10K1Q8NGX5 313 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 OR5AK2Q8NH90 309 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 RFESDQ8TAC1 157 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 CNIH3Q8TBE1 160 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 PLPPR1Q8TBJ4 325 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 MRAPQ8TCY5 172 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 SGCDQ92629 289 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 ORAI1Q96D31 301 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 CYYR1Q96J86 154 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 NR1H4Q96RI1 486 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-207ENST00000475549 GAL3ST2Q9H3Q3 398 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 NEK6Q9HC98 313 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 FAM118AQ9NWS6 357 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 KIF25Q9UIL4 384 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 PSG11Q9UQ72 335 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 GMPPBQ9Y5P6 360 aa5.57□□□□□ -1.52
HDAC3-207ENST00000475549 COL7A1Q02388 2944 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 MEIKINA0A087WXM9 373 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 LOC100130705A0A1B0GUX0 176 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 A0A1W2PPE3 182 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 A0A1W2PPI3 338 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 TMEM212A6NML5 194 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF729A6NN14 1252 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-207ENST00000475549 J3QR06 171 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 TOR1AO14656 332 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 CIB2O75838 187 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 CDRT1O95170 752 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 FADS2O95864 444 aaKnown RBP5.56□□□□□ -1.52
HDAC3-207ENST00000475549 HCKP08631 526 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 NFYBP25208 207 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 BRS3P32247 399 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 SSTR5P35346 364 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 SOX2P48431 317 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 ETV1P50549 477 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 PRRX1P54821 245 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 PAX5Q02548 391 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 RAB40BQ12829 278 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 RBM39Q14498 530 aaKnown RBP5.56□□□□□ -1.52
HDAC3-207ENST00000475549 ARSJQ5FYB0 599 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-207ENST00000475549 OR2G6Q5TZ20 316 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 C16orf82Q7Z2V1 217 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF329Q86UD4 541 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 DRAM1Q8N682 238 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF565Q8N9K5 539 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 OR4D6Q8NGJ1 314 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 OR56B4Q8NH76 319 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 OR9G1Q8NH87 305 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 MRGPRDQ8TDS7 321 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 CAPSLQ8WWF8 208 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 NOL4LQ96MY1 436 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-207ENST00000475549 NCOR1P1Q9H4R4 102 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 TAS2R4Q9NYW5 299 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 CALYQ9NYX4 217 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 OR6C3Q9NZP0 311 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 DHDHQ9UQ10 334 aa5.56□□□□□ -1.52
HDAC3-207ENST00000475549 TSSC4Q9Y5U2 329 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-207ENST00000475549 TET2Q6N021 2002 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-207ENST00000475549 WI2-2373I1.2A0A1W2PRP0 233 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 FUOMA2VDF0 154 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 MAGEA13PA6NCF6 341 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 OOSP1A8MZH6 123 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 C15orf65H3BRN8 121 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 CLIC3O95833 236 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 MPIG6BO95866 241 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 LALBAP00709 142 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 IL1AP01583 271 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 ALDOBP05062 364 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 SNRNP70P08621 437 aaKnown RBP5.55□□□□□ -1.52
HDAC3-207ENST00000475549 OCM2P0CE71 109 aa5.55□□□□□ -1.52
HDAC3-207ENST00000475549 OCMP0CE72 109 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-207ENST00000475549 FAM106CPP0CH98 169 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms