RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 BOD1L1Q8NFC6 3051 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 MLNRO43193 412 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 PGA5P0DJD9 388 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 KITLGP21583 273 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 TOR2AQ5JU69 321 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 CLLU1Q5K131 121 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 TIMM23BQ5SRD1 257 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF324BQ6AW86 544 aaPredicted RBP13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 Q6P435 159 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 C5orf24Q7Z6I8 188 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 SLC51BQ86UW2 128 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 C1orf174Q8IYL3 243 aa13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 MRPL30Q8TCC3 161 aaKnown RBP13.05□□□□□ -0.32
RPUSD3-215ENST00000475470 KANTRA0A1W2PQU2 76 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 CEACAM8P31997 349 aaPredicted RBP13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF83P51522 516 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 TBR1Q16650 682 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 CISD2Q8N5K1 135 aaKnown RBP13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 RSRP1Q9BUV0 290 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 CXXC4Q9H2H0 198 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 GSKIPQ9P0R6 139 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 LINC00862A6NCI5 91 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 GFRA3O60609 400 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 CTXN2P0C2S0 81 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 NAAAQ02083 359 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 NHLH1Q02575 133 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 SP6Q3SY56 376 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 PAN3Q58A45 887 aaKnown RBP13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 BEX5Q5H9J7 111 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 CCDC71LQ8N9Z2 235 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 SUN5Q8TC36 379 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 DCUN1D4Q92564 292 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 MUCL1Q96DR8 90 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 RASL12Q9NYN1 266 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 MEMO1Q9Y316 297 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 SPTBN2O15020 2390 aa13.04□□□□□ -0.32
RPUSD3-215ENST00000475470 TRBV6-6A0A0A6YYG2 114 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 RPS10-NUDT3A0A1W2PQS6 291 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 RNF222A6NCQ9 220 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 ZSCAN5BA6NJL1 495 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 K7ENP7 123 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 M0R1B8 84 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 SIRPB1O00241 398 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 OR2H2O95918 312 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 IFNA21P01568 189 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 OR5AC1P0C628 307 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 GLI4P10075 376 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 MBNL2Q5VZF2 373 aaKnown RBP13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 ALKAL2Q6UX46 152 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 C20orf204Q6ZNR8 217 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 GALNT14Q96FL9 552 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 PRR14LQ5THK1 2151 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 PRRG2O14669 202 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 SH2D1BO14796 132 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 B3GALNT1O75752 331 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 SPDEFO95238 335 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 MDH2P40926 338 aaKnown RBP13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 HERPUD1Q15011 391 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 FIP1L1Q6UN15 594 aaKnown RBP13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 POC1AQ8NBT0 407 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 OR11L1Q8NGX0 322 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 SUCNR1Q9BXA5 334 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 MSL2Q9HCI7 577 aa13.03□□□□□ -0.32
RPUSD3-215ENST00000475470 A6NLC8 198 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 TMEM187Q14656 261 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF146Q15072 292 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 IAH1Q2TAA2 248 aaPredicted RBP13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 RGS7BPQ6MZT1 257 aaPredicted RBP13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 Q6ZR03 302 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 COMMD7Q86VX2 200 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 SPERTQ8NA61 448 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 RNF126Q9BV68 326 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 MSRB2Q9Y3D2 182 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 SHANK1Q9Y566 2161 aa13.02□□□□□ -0.32
RPUSD3-215ENST00000475470 APC2O95996 2303 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 I3L521 148 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 SLC33A1O00400 549 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 KCNAB3O43448 404 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 BCL2L11O43521 198 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 SCO1O75880 301 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 ACAA1P09110 424 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 PET100P0DJ07 73 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 RCC1P18754 421 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 BMP5P22003 454 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 SPIN3Q5JUX0 258 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 Q8NA96 180 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 SCARB1Q8WTV0 552 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 SECTM1Q8WVN6 248 aa13.02□□□□□ -0.33
RPUSD3-215ENST00000475470 TRBV6-7A0A0A0MS04 114 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 IGKV1-6A0A0C4DH72 117 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 TUBAL3A6NHL2 446 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 H7C1Q1 480 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 GNRHRP30968 328 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 TDGF1P3P51864 188 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 UBA52P62987 128 aaKnown RBP13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 RAB32Q13637 225 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 GGNBP1Q5YKI7 109 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 ZNF880Q6PDB4 577 aa13.01□□□□□ -0.33
RPUSD3-215ENST00000475470 PRSS54Q6PEW0 395 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms