RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 UFSP1Q6NVU6 142 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 MRPL54Q6P161 138 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 ZNF343Q6P1L6 599 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 ZNF101Q8IZC7 436 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 MUC15Q8N387 334 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 TMEM217Q8N7C4 229 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 OR52B4Q8NGK2 314 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 OR10G4Q8NGN3 311 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 OR13G1Q8NGZ3 307 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 MARCH1Q8TCQ1 289 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 PROKR1Q8TCW9 393 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 DCUN1D4Q92564 292 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 SARAFQ96BY9 339 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 GRAMD2BQ96HH9 432 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 GNRHR2Q96P88 292 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 AQP10Q96PS8 301 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 SCRT1Q9BWW7 348 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 RSPO3Q9BXY4 272 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 TPSD1Q9BZJ3 242 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 MAP1LC3BQ9GZQ8 125 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 THAP10Q9P2Z0 257 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 FBXW11Q9UKB1 542 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 NXT1Q9UKK6 140 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 PLAGL1Q9UM63 463 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 MRPS33Q9Y291 106 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 NEUROG3Q9Y4Z2 214 aa5.18□□□□□ -1.58
ECHDC1-215ENST00000475319 TRBV5-3A0A0A0MS03 114 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 A0A1W2PQM1 296 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 LRP5LA4QPB2 252 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 MYADML2A6NDP7 307 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 SMIM9A6NGZ8 99 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ANKRD30BLA7E2S9 258 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 GAPDHSO14556 408 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 UPK3AO75631 287 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 JTBO76095 146 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 VENTXO95231 258 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 CLDN1O95832 211 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 NRASP01111 189 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 HSPB1P04792 205 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 RAB40ALP0C0E4 278 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 COX7A2P14406 83 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ARSAP15289 507 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 GDF5P43026 501 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 CX3CR1P49238 355 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 CNN1P51911 297 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 TAS2R20P59543 309 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 WDR5P61964 334 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ARG2P78540 354 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 MEF2BQ02080 365 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 MIDNQ504T8 468 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 SPATA45Q537H7 98 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ACTL10Q5JWF8 245 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 AMMECR1LQ6DCA0 310 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 TXNRD3NBQ6F5E7 133 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 C12orf54Q6X4T0 127 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ZNF66Q6ZN08 573 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 FOXI2Q6ZQN5 318 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 MOB1BQ7L9L4 216 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 TSEN54Q7Z6J9 526 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 TMEM173Q86WV6 379 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 C1orf174Q8IYL3 243 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 LRRC75A-AS1Q8N1F1 130 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ZNF709Q8N972 641 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 OR2T33Q8NG76 320 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 BLNKQ8WV28 456 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 LENG9Q96B70 501 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 FGGYQ96C11 551 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 CXorf40BQ96DE9 158 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ZMYND19Q96E35 227 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ATXN7L3BQ96GX2 97 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 VSTM2LQ96N03 204 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 CABLES2Q9BTV7 478 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 SNRNP25Q9BV90 132 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 NMES1Q9C002 83 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 CHRNA10Q9GZZ6 450 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 R3HDMLQ9H3Y0 253 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 MED29Q9NX70 200 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 THYN1Q9P016 225 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 FBXL17Q9UF56 701 aa5.17□□□□□ -1.58
ECHDC1-215ENST00000475319 ZSWIM8A7E2V4 1837 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 MAST2Q6P0Q8 1798 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 TRAV1-2A0A0B4J238 106 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 PSMB11A5LHX3 300 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 GLOD5A6NK44 160 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 ZNF727A8MUV8 499 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 M0R1X1 148 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 DEGS1O15121 323 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 SPRY2O43597 315 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 RAMP1O60894 148 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 CRYGBP07316 175 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 CELP19835 753 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 TCN2P20062 427 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 USF1P22415 310 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 GATA3P23771 443 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 LMO1P25800 156 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 PTH2RP49190 550 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 P2RX1P51575 399 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 HLA-DRB3P79483 266 aa5.16□□□□□ -1.58
ECHDC1-215ENST00000475319 NFATC4Q14934 902 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms