RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 RAB18Q9NP72 206 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 UFSP2Q9NUQ7 469 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 RDH8Q9NYR8 311 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 ZNF835Q9Y2P0 537 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 SPEF1Q9Y4P9 236 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 IGF2RP11717 2491 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 SPTBN4Q9H254 2564 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 CRYM-AS1A6NIL9 109 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 PHLDA2Q53GA4 152 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 VHLLQ6RSH7 139 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 MRGPRGQ86SM5 289 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 ZNF546Q86UE3 836 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 SPERTQ8NA61 448 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 MFFQ9GZY8 342 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 ATP23Q9Y6H3 246 aa15.51■□□□□ 0.07
SEC61A2-213ENST00000475268 ZGRF1Q86YA3 2104 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 SLC33A1O00400 549 aaPredicted RBP15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 PPYP01298 95 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 TK1P04183 234 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 RBMXP38159 391 aaKnown RBP15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 AP2S1P53680 142 aaPredicted RBP15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 ZNF146Q15072 292 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 C3orf36Q3SXR2 165 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 C11orf87Q6NUJ2 197 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 TMUB2Q71RG4 321 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 POC1AQ8NBT0 407 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 OR14J1Q9UGF5 321 aa15.5■□□□□ 0.07
SEC61A2-213ENST00000475268 MPTX1A8MV57 137 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 SH2D1BO14796 132 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 WNT9BO14905 357 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 RCC1P18754 421 aaPredicted RBP15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 S100A11P31949 105 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 HOXA4Q00056 320 aaPredicted RBP15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 HERPUD1Q15011 391 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 ARL6Q9H0F7 186 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 HOXB5P09067 269 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 ACAA1P09110 424 aaPredicted RBP15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 ATXN7L3Q14CW9 347 aaPredicted RBP15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 SPIN3Q5JUX0 258 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 FIP1L1Q6UN15 594 aaKnown RBP15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 SLC38A6Q8IZM9 456 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 OR2Z1Q8NG97 314 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 LILRB4Q8NHJ6 448 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 RTN4IP1Q8WWV3 396 aaPredicted RBP15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 PIK3IP1Q96FE7 263 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 TMEM165Q9HC07 324 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 SLC2A9Q9NRM0 540 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 C1orf123Q9NWV4 160 aa15.49■□□□□ 0.07
SEC61A2-213ENST00000475268 ATP6V1G2-DDX39BF2Z307 99 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 DIRAS3O95661 229 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 RPA2P15927 270 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 CCKARP32238 428 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 CEBPDP49716 269 aaPredicted RBP15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 UCP3P55916 312 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 WDR82Q6UXN9 313 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 SYT3Q9BQG1 590 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 NMES1Q9C002 83 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 HES4Q9HCC6 221 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 KCNIP3Q9Y2W7 256 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 TRBV6-6A0A0A6YYG2 114 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 IGKV1-6A0A0C4DH72 117 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 hCG_1807616A0A1W2PRN6 198 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 HAND1O96004 215 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 CFDP00746 253 aaPredicted RBP15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 ZNF250P15622 560 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 GLRXP35754 106 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 CYCSP99999 105 aaKnown RBP15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 RBPJQ06330 500 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 SP6Q3SY56 376 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 OR11L1Q8NGX0 322 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 THAP6Q8TBB0 222 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 TLNRD1Q9H1K6 362 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 NAA60Q9H7X0 242 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 RASL12Q9NYN1 266 aa15.48■□□□□ 0.07
SEC61A2-213ENST00000475268 SHANK1Q9Y566 2161 aa15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 C16orf97H3BN30 126 aa15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 SLC25A4P12235 298 aa15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 MDH2P40926 338 aaKnown RBP15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 NKX6-1P78426 367 aaPredicted RBP15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 EXOSC2Q13868 293 aaKnown RBP15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 TMEM65Q6PI78 240 aa15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 RELL2Q8NC24 303 aaPredicted RBP15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 PLPPR1Q8TBJ4 325 aa15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 OR10C1Q96KK4 312 aa15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 RSRP1Q9BUV0 290 aa15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 ELOVL5Q9NYP7 299 aa15.47■□□□□ 0.07
SEC61A2-213ENST00000475268 TRAV39A0A0B4J263 110 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 IFNA7P01567 189 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 CTXN2P0C2S0 81 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 OR5AC1P0C628 307 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 PSMB6P28072 239 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 KLF3P57682 345 aaPredicted RBP15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 ZNF880Q6PDB4 577 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 OR8H3Q8N146 312 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 TLN1Q9Y490 2541 aaKnown RBP15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 A0A1B0GWJ7 208 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 IGHV3-13P01766 116 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 HLA-DRB3P79483 266 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 MZT1Q08AG7 82 aa15.46■□□□□ 0.07
SEC61A2-213ENST00000475268 ZNF497Q6ZNH5 498 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms