RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 CRYGSP22914 178 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 IL3RAP26951 378 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 GCH1P30793 250 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 LSSP48449 732 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 LGALS4P56470 323 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 ACOT6Q3I5F7 207 aaPredicted RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 CTXN3Q4LDR2 81 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 OR10J3Q5JRS4 329 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 C17orf64Q86WR6 236 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 TMEM252Q8N6L7 170 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 NUDT10Q8NFP7 164 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 OR5AU1Q8NGC0 362 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 OR5B3Q8NH48 314 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 PIFOQ8TCI5 191 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 SNX22Q96L94 193 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 TP53RKQ96S44 253 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 NKX3-1Q99801 234 aaPredicted RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 OR11A1Q9GZK7 315 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 HCFC1R1Q9NWW0 138 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 WIPI2Q9Y4P8 454 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 FREM3P0C091 2139 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 NCOA6Q14686 2063 aaPredicted RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 DOCK8Q8NF50 2099 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 H7BYZ3 331 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 TNFSF15O95150 251 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 TNFP01375 233 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 IGLV2-8P01709 118 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 GPX1P07203 203 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 AREGP15514 252 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 SOX2P48431 317 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 BRWD1-AS2P59051 145 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 TAS2R46P59540 309 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 RPS15AP62244 130 aaKnown RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 CSNK2A1P68400 391 aaPredicted RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 CDK3Q00526 305 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 TLE4Q04727 773 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 CCL14Q16627 93 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 CR1LQ2VPA4 569 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 C1orf53Q5VUE5 145 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 RTL6Q6ICC9 239 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 WBP2NLQ6ICG8 309 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 DEFB125Q8N687 156 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 TMEM217Q8N7C4 229 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 BCORP1Q8N888 145 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 CSNK2A3Q8NEV1 391 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 OR8B3Q8NGG8 313 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 LRRC3BQ96PB8 259 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 OR8B2Q96RD0 313 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 ATP5SQ99766 215 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 NIPSNAP3BQ9BS92 247 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 FOXQ1Q9C009 403 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 NELFAQ9H3P2 528 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 VSIRQ9H7M9 311 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 Q9N2K0 584 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 COMMD9Q9P000 198 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 GRHPRQ9UBQ7 328 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 CGGBP1Q9UFW8 167 aaPredicted RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 NAT8Q9UHE5 227 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 INSL6Q9Y581 213 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 LIPGQ9Y5X9 500 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 WSB1Q9Y6I7 421 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 SMCO3A2RU48 225 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 C5orf63A6NC05 138 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 SHISA8B8ZZ34 492 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 HSBP1L1C9JCN9 74 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 RPP14O95059 124 aaKnown RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 GPR75O95800 540 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 TSPAN15O95858 294 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 GNRHRP30968 328 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 PTGER1P34995 402 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 CLDN15P56746 228 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 RPL27P61353 136 aaKnown RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 SERF2P84101 59 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 EXOSC7Q15024 291 aaKnown RBP3.49□□□□□ -1.85
USP16-205ENST00000474835 MEP1BQ16820 701 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 PLPPR5Q32ZL2 321 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 PLXDC2Q6UX71 529 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 C16orf82Q7Z2V1 217 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 OSR2Q8N2R0 312 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 OR5D13Q8NGL4 314 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 SPSB4Q96A44 273 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 REEP6Q96HR9 211 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 ELOVL1Q9BW60 279 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 ELOVL3Q9HB03 270 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.49□□□□□ -1.85
USP16-205ENST00000474835 PDE4DIPQ5VU43 2346 aa3.49□□□□□ -1.85
USP16-205ENST00000474835 IGKV1-6A0A0C4DH72 117 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 A0A0G2JRQ6 117 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A10PA6NDY2 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A18PA6NE21 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A16PA6NEW6 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A20PA6NIJ5 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A8PA6NJQ4 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A7PA6NKC0 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A22PA8MWA6 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A12PA8MX19 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A5PA8MXJ8 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A23PA8MXZ1 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A15PP0C7V4 464 aa3.48□□□□□ -1.85
USP16-205ENST00000474835 FAM90A13PP0C7W8 464 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms