RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 A0A1W2PPE3 182 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 H3BSH0 61 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 K7EQS6 105 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 GPR37O15354 613 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 VENTXO95231 258 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 SEMA4FO95754 770 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 HLA-HP01893 362 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 TK1P04183 234 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 CD63P08962 238 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 BCL2P10415 239 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 FCGR2AP12318 317 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 CD99P14209 185 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 BCKDHBP21953 392 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 ATP6V0CP27449 155 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 HOXA6P31267 233 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 SRP14P37108 136 aaKnown RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 GABRA4P48169 554 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 EFNA3P52797 238 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 CLDN15P56746 228 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 ACY1Q03154 408 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 RELQ04864 619 aaPredicted RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 TMEM196Q5HYL7 178 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 SLC25A24Q6NUK1 477 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 FOXL2NBQ6ZUU3 175 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 TIPARPQ7Z3E1 657 aaKnown RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 PIP4P1Q86T03 277 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 SAXO1Q8IYX7 474 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 IL22RA1Q8N6P7 574 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 OR2V1Q8NHB1 315 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 CLDND2Q8NHS1 167 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 Q8WTZ3 238 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 RNF138Q8WVD3 245 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 MBD3L1Q8WWY6 194 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 ROBO4Q8WZ75 1007 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 ERGIC1Q969X5 290 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 R3HDM4Q96D70 268 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 MSI2Q96DH6 328 aaKnown RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 GMPPAQ96IJ6 420 aaPredicted RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 WDR77Q9BQA1 342 aaPredicted RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 CABLES2Q9BTV7 478 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 REPIN1Q9BWE0 567 aaKnown RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 GPR87Q9BY21 358 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 SMIM3Q9BZL3 60 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 TGIF2Q9GZN2 237 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 BANF2Q9H503 90 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 FAM60AQ9NP50 221 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 P4HTMQ9NXG6 502 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 NAT8Q9UHE5 227 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 RCL1Q9Y2P8 373 aaKnown RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 UBE2J1Q9Y385 318 aaPredicted RBP6.99□□□□□ -1.29
CCDC93-208ENST00000474546 LHFPL6Q9Y693 200 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 CELSR2Q9HCU4 2923 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 CRYBG3Q68DQ2 2970 aa6.99□□□□□ -1.29
CCDC93-208ENST00000474546 TRBV23OR9-2A0A075B6M9 112 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 TRAV9-1A0A075B6T8 112 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 C3orf85A0A1B0GTC6 90 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 A0A1W2PQF6 199 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 GJE1A6NN92 205 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 C9J4A7 227 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 FAM90A26D6RGX4 464 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 STMND1H3BQB6 276 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 SDCBPO00560 298 aaPredicted RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 MPPED1O15442 326 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 PHF1O43189 567 aaPredicted RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 PDCD6O75340 191 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 YIF1AO95070 293 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 KLF8O95600 359 aaPredicted RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 TCN2P20062 427 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 EPHA1P21709 976 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 OTX1P32242 354 aaPredicted RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 PDLIM4P50479 330 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 FUT6P51993 359 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 FBXW4P57775 412 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 PCBD1P61457 104 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 HIST1H3AP68431 136 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 ICAM4Q14773 271 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 SLC10A1Q14973 349 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 NSDHLQ15738 373 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 C9orf152Q5JTZ5 239 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 KIAA0895LQ68EN5 471 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 TANGO2Q6ICL3 276 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 LCN10Q6JVE6 187 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 OGFOD3Q6PK18 319 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 FAM57BQ71RH2 274 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 PLXDC1Q8IUK5 500 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 CISD2Q8N5K1 135 aaKnown RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 OR5D13Q8NGL4 314 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 CCL4L1Q8NHW4 92 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 PPP1R14AQ96A00 147 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 ZNF775Q96BV0 537 aaPredicted RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 FAM71F1Q96KD3 344 aaPredicted RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 PYGO2Q9BRQ0 406 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 C20orf24Q9BUV8 137 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 PLK3Q9H4B4 646 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 ELL3Q9HB65 397 aaPredicted RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 CDH20Q9HBT6 801 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 Q9N2K0 584 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 MANBALQ9NQG1 85 aa6.98□□□□□ -1.29
CCDC93-208ENST00000474546 LRFN1Q9P244 771 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms