RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 RXFP4Q8TDU9 374 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 STARD4Q96DR4 205 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 DERL3Q96Q80 235 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 BANF2Q9H503 90 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 PSG11Q9UQ72 335 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MYO9BQ13459 2157 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 THSD7BQ9C0I4 1608 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 CTDSPLO15194 276 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 RER1O15258 196 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 HPXP02790 462 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ISG15P05161 165 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 PGA4P0DJD7 388 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 OR3A1P47881 315 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MMP15P51511 669 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MFAP4P55083 255 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 P2RX3P56373 397 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 DEFA5Q01523 94 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ROM1Q03395 351 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 IL24Q13007 206 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 FAM27D1Q5T7N8 215 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ABLIM2Q6H8Q1 611 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM182Q6ZP80 229 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 LYG2Q86SG7 212 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 OR8B12Q8NGG6 310 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 SCARB1Q8WTV0 552 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 COPS9Q8WXC6 57 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 DVL3Q92997 716 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 WDYHV1Q96HA8 205 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 HARBI1Q96MB7 349 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TCEAL7Q9BRU2 100 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 ASF1BQ9NVP2 202 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 TECRQ9NZ01 308 aaKnown RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 DPM3Q9P2X0 92 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 PKIGQ9Y2B9 76 aa4.02□□□□□ -1.77
CCNL1-215ENST00000474539 MRPS18BQ9Y676 258 aaKnown RBP4.02□□□□□ -1.77
CCNL1-215ENST00000474539 A0A0B4J2A0 478 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 FCGR3BO75015 233 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 TOX4O94842 621 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ZP3P21754 424 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 CDAP32320 146 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 LPAR6P43657 344 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 LOXL3P58215 753 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 SNRPD3P62318 126 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 POLR2GP62487 172 aaKnown RBP eCLIP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ENDOGQ14249 297 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 CD226Q15762 336 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 RRN3P1Q2M238 152 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 HYAL4Q2M3T9 481 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MOGAT2Q3SYC2 334 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 WDR38Q5JTN6 314 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 SLC35E4Q6ICL7 350 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 RBM45Q8IUH3 476 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 UBAC2Q8NBM4 344 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 OR5AP2Q8NGF4 316 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 OR13F1Q8NGS4 319 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 OR10J6PQ8NGY7 276 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 R3HDM4Q96D70 268 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 NIPSNAP3BQ9BS92 247 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 AUNIPQ9H7T9 357 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 SLC7A10Q9NS82 523 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MRPL22Q9NWU5 206 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 FAM53CQ9NYF3 392 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 SHPKQ9UHJ6 478 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 TINAGQ9UJW2 476 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 HSF4Q9ULV5 492 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MYH15Q9Y2K3 1946 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 IGKV3D-15A0A087WSY6 115 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 A0A1B0GU03 582 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MBD3L4A6NDZ8 208 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MBD3L3A6NE82 208 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MBD3L5A6NJ08 208 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 WISP1O95388 367 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ZIC2O95409 532 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 CDS2O95674 445 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 GIFP27352 417 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 PIGPP57054 158 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 RPS20P60866 119 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ISL1P61371 349 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 NKX6-1P78426 367 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 PSG9Q00887 426 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 HIKESHIQ53FT3 197 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 PHLDA2Q53GA4 152 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF362Q5T0B9 420 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 LCN10Q6JVE6 187 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 BTNL8Q6UX41 500 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 DTX2Q86UW9 622 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 DTX1Q86Y01 620 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM217Q8N7C4 229 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 LINC01356Q8N9X3 169 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MBD3L2Q8NHZ7 208 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 ITLN1Q8WWA0 313 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 VWCEQ96DN2 955 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 FAM210AQ96ND0 272 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 TUBA4BQ9H853 241 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 PLSCR4Q9NRQ2 329 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 GPR27Q9NS67 375 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MRPS18AQ9NVS2 196 aaKnown RBP4.01□□□□□ -1.77
CCNL1-215ENST00000474539 SLC2A8Q9NY64 477 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 MCM3APO60318 1980 aa4.01□□□□□ -1.77
CCNL1-215ENST00000474539 GOLGB1Q14789 3259 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms