RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 OR12D1P0DN82 309 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 PTNP21246 168 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 BGNP21810 368 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 TSPAN5P62079 268 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 CASP8Q14790 479 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 HBMQ6B0K9 141 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 CYHR1Q6ZMK1 362 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 TMEM25Q86YD3 366 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 FAM58AQ8N1B3 248 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 ACBD4Q8NC06 268 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 OR2M3Q8NG83 312 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 OR2V1Q8NHB1 315 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 CLDN23Q96B33 292 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 FMC1Q96HJ9 113 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 ARL6Q9H0F7 186 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 FBXO44Q9H4M3 255 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 CRLF2Q9HC73 371 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 VPREB3Q9UKI3 123 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 POMPQ9Y244 141 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 U3KQK5 164 aa1.25□□□□□ -2.21
ECHDC1-213ENST00000474240 PTPRKQ15262 1439 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 IGHV2-26A0A0B4J1V2 119 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 RAB19A4D1S5 217 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 MGAT4DA6NG13 374 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 ERICH4A6NGS2 130 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 LY6LH3BQJ8 138 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 CYTH3O43739 400 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 OTCP00480 354 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 CD8AP01732 235 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 CCDC172P0C7W6 258 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 GABRA1P14867 456 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 AKR1C4P17516 323 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 CCNOP22674 350 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 TUBG1P23258 451 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 NUP62P37198 522 aaPredicted RBP1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 AKR1C2P52895 323 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 HBG1P69891 147 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 HBG2P69892 147 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 MMDQ15546 238 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 TRIP13Q15645 432 aaPredicted RBP1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 HNRNPA1L2Q32P51 320 aaKnown RBP1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 C6orf183Q5T699 404 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 NIPAL1Q6NVV3 410 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 ASCL4Q6XD76 172 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 ZNF767PQ75MW2 155 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 PID1Q7Z2X4 250 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 GAPTQ8N292 157 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 DNAAF3Q8N9W5 541 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 OR4K17Q8NGC6 315 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 OR5C1Q8NGR4 320 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 LMX1AQ8TE12 382 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 CCL17Q92583 94 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 GLT1D1Q96MS3 346 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 BIRC8Q96P09 236 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 LINC01587Q99440 93 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 ZNF436Q9C0F3 470 aaPredicted RBP1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 METTL8Q9H825 291 aaKnown RBP1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 TUBG2Q9NRH3 451 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 ZNF337Q9Y3M9 751 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 TMEM131Q92545 1883 aa1.24□□□□□ -2.21
ECHDC1-213ENST00000474240 TRAV8-2A0A0B4J237 113 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 PLPP3O14495 311 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 FFAR1O14842 300 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 TCF21O43680 179 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 GMDSO60547 372 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 CA2P00918 260 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 CRYGCP07315 174 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 P0DMU3 169 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 FAM231AP0DMU4 169 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 FAM231CP0DMU5 169 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 CTLA4P16410 223 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 ATF1P18846 271 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 GCLMP48507 274 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 ZNF567Q8N184 647 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 MUC15Q8N387 334 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 TCAIMQ8N3R3 496 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 C2orf73Q8N5S3 287 aaPredicted RBP1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 ZNF321PQ8N8H1 164 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 OR10D4PQ8NGN7 298 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 TOP1MTQ969P6 601 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 DDIT4LQ96D03 193 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 ZMYND19Q96E35 227 aaPredicted RBP1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 ZNF396Q96N95 335 aaPredicted RBP1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 MAP1LC3CQ9BXW4 147 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 SLC19A3Q9BZV2 496 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 OR2D2Q9H210 308 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 HAUS4Q9H6D7 363 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 TMBIM4Q9HC24 238 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 OR5V1Q9UGF6 321 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 DYSFO75923 2080 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 KIF27Q86VH2 1401 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 ADAMTSL3P82987 1691 aa1.23□□□□□ -2.21
ECHDC1-213ENST00000474240 CEP170Q5SW79 1584 aa1.22□□□□□ -2.21
ECHDC1-213ENST00000474240 A8MWP6 167 aa1.22□□□□□ -2.21
ECHDC1-213ENST00000474240 CRXO43186 299 aaPredicted RBP1.22□□□□□ -2.21
ECHDC1-213ENST00000474240 DENRO43583 198 aaKnown RBP1.22□□□□□ -2.21
ECHDC1-213ENST00000474240 SLC25A20O43772 301 aa1.22□□□□□ -2.21
ECHDC1-213ENST00000474240 VAPBO95292 243 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms