RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 A0A1W2PP11 408 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 ODAMA1E959 279 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 MEIOCA2RUB1 952 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 MCRIP1C9JLW8 97 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 MPIG6BO95866 241 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 COX7A1P24310 79 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 GLIPR1P48060 266 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 SRSF2Q01130 221 aaKnown RBP11.26□□□□□ -0.61
USF1-205ENST00000473969 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
USF1-205ENST00000473969 NEDD8Q15843 81 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 RAB11BQ15907 218 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 ZNF782Q6ZMW2 699 aaPredicted RBP11.26□□□□□ -0.61
USF1-205ENST00000473969 TSPAN14Q8NG11 270 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 KCNG3Q8TAE7 436 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 ZFAND2BQ8WV99 257 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 TNFRSF14Q92956 283 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 IFT22Q9H7X7 185 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 ZMAT3Q9HA38 289 aaKnown RBP11.26□□□□□ -0.61
USF1-205ENST00000473969 TAS2R3Q9NYW6 316 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 STUB1Q9UNE7 303 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 V9GY05 133 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 FAM90A10PA6NDY2 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A18PA6NE21 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A16PA6NEW6 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A20PA6NIJ5 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A8PA6NJQ4 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A7PA6NKC0 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A22PA8MWA6 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A12PA8MX19 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A5PA8MXJ8 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A23PA8MXZ1 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 BPNT1O95861 308 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FBP1P09467 338 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A15PP0C7V4 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A13PP0C7W8 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A14PP0C7W9 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM90A24PP0C7X0 464 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 ARSBP15848 533 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 DLX1P56177 255 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 MIDNQ504T8 468 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 C22orf42Q6IC83 251 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 OR52W1Q6IF63 320 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 CD200R1LQ6Q8B3 271 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 LYPD6Q86Y78 171 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 PNKDQ8N490 385 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 CORO2AQ92828 525 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 FAM46BQ96A09 425 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 SLC25A28Q96A46 364 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 NEDD4LQ96PU5 975 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 TMEM59Q9BXS4 323 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 NCOR1P1Q9H4R4 102 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 PEX16Q9Y5Y5 336 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 SOX21Q9Y651 276 aaPredicted RBP11.25□□□□□ -0.61
USF1-205ENST00000473969 SESN1Q9Y6P5 492 aa11.25□□□□□ -0.61
USF1-205ENST00000473969 TRAV1-2A0A0B4J238 106 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 A0A0U1RQK1 487 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 MDFIC2A0A1B0GVS7 189 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 TMEM30CPA0ZSE6 113 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 BTBD17A6NE02 478 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 ZNF729A6NN14 1252 aaPredicted RBP11.24□□□□□ -0.61
USF1-205ENST00000473969 SLC17A2O00624 439 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 SLC22A1O15245 554 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 CLPXO76031 633 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 RAB3BP20337 219 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 SAA4P35542 130 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 GLP1RP43220 463 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 DLX6P56179 175 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 DYNC1I2Q13409 638 aaKnown RBP11.24□□□□□ -0.61
USF1-205ENST00000473969 SYT6Q5T7P8 510 aaPredicted RBP11.24□□□□□ -0.61
USF1-205ENST00000473969 Q6YL49 198 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 TMEM104Q8NE00 496 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 COQ2Q96H96 371 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 Q96M66 194 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 ZNF48Q96MX3 618 aaPredicted RBP11.24□□□□□ -0.61
USF1-205ENST00000473969 URM1Q9BTM9 101 aaKnown RBP11.24□□□□□ -0.61
USF1-205ENST00000473969 DPAGT1Q9H3H5 408 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 KIF25Q9UIL4 384 aa11.24□□□□□ -0.61
USF1-205ENST00000473969 DNAJC9-AS1A6NH13 148 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
USF1-205ENST00000473969 ARG1P05089 322 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 GLAP06280 429 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 VSIG8P0DPA2 414 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 CD36P16671 472 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 FUT3P21217 361 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 CDK2P24941 298 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 UBA52P62987 128 aaKnown RBP11.23□□□□□ -0.61
USF1-205ENST00000473969 ACTG1P63261 375 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 P2RY14Q15391 338 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 KRTAP24-1Q3LI83 254 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 RSBN1Q5VWQ0 802 aaPredicted RBP11.23□□□□□ -0.61
USF1-205ENST00000473969 SLC35E4Q6ICL7 350 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 RAB12Q6IQ22 244 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 TCF23Q7RTU1 214 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 OR2W3Q7Z3T1 314 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 C11orf42Q8N5U0 333 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 ZDHHC22Q8N966 263 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 SSMEM1Q8WWF3 244 aa11.23□□□□□ -0.61
USF1-205ENST00000473969 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms