RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 SLC6A1P30531 599 aa9□□□□□ -0.97
SP140-208ENST00000473711 FAUP35544 74 aaKnown RBP9□□□□□ -0.97
SP140-208ENST00000473711 BCAP31P51572 246 aa9□□□□□ -0.97
SP140-208ENST00000473711 CBX3Q13185 183 aa9□□□□□ -0.97
SP140-208ENST00000473711 MICBQ29980 383 aa9□□□□□ -0.97
SP140-208ENST00000473711 PLA1AQ53H76 456 aa9□□□□□ -0.97
SP140-208ENST00000473711 OXLD1Q5BKU9 147 aa9□□□□□ -0.97
SP140-208ENST00000473711 SP5Q6BEB4 398 aaPredicted RBP9□□□□□ -0.97
SP140-208ENST00000473711 C11orf71Q6IPW1 123 aa9□□□□□ -0.97
SP140-208ENST00000473711 FAM90A1Q86YD7 464 aa9□□□□□ -0.97
SP140-208ENST00000473711 DUSP18Q8NEJ0 188 aa9□□□□□ -0.97
SP140-208ENST00000473711 BEST4Q8NFU0 473 aa9□□□□□ -0.97
SP140-208ENST00000473711 PLPPR1Q8TBJ4 325 aa9□□□□□ -0.97
SP140-208ENST00000473711 TRAF4Q9BUZ4 470 aaPredicted RBP9□□□□□ -0.97
SP140-208ENST00000473711 CHST6Q9GZX3 395 aa9□□□□□ -0.97
SP140-208ENST00000473711 RAB1BQ9H0U4 201 aa9□□□□□ -0.97
SP140-208ENST00000473711 ITGB1BP2Q9UKP3 347 aa9□□□□□ -0.97
SP140-208ENST00000473711 CHD3Q12873 2000 aaKnown RBP9□□□□□ -0.97
SP140-208ENST00000473711 TEX15Q9BXT5 2789 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 PPIAL4EA0A075B759 164 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 IGHV1-69-2A0A0G2JMI3 117 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 DISC1C4P0D8 188 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 PPIAL4DF5H284 164 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 LYNX1G3V0Z9 82 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 TMEM178BH3BS89 294 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 J3QKU1 62 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 PSPNO60542 156 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 GYPAP02724 150 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 AMY2AP04746 511 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 ZNF735P0CB33 412 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 PPIAL4FP0DN26 164 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 LYNX1P0DP58 116 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 HRH1P35367 487 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 OR3A3P47888 321 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 ATXN7L3Q14CW9 347 aaPredicted RBP8.99□□□□□ -0.97
SP140-208ENST00000473711 CHRFAM7AQ494W8 412 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 RNASE10Q5GAN6 216 aaKnown RBP8.99□□□□□ -0.97
SP140-208ENST00000473711 PLET1Q6UQ28 207 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 Q6ZPA2 131 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 C5orf24Q7Z6I8 188 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 DTX2Q86UW9 622 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 C1orf87Q8N0U7 546 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 OR51S1Q8NGJ8 323 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 OR5H2Q8NGV7 314 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 MRPL30Q8TCC3 161 aaKnown RBP8.99□□□□□ -0.97
SP140-208ENST00000473711 CCDC107Q8WV48 283 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 DEDD2Q8WXF8 326 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 SLC6A7Q99884 636 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 RIMS4Q9H426 269 aaPredicted RBP8.99□□□□□ -0.97
SP140-208ENST00000473711 SEBOXQ9HB31 216 aaPredicted RBP8.99□□□□□ -0.97
SP140-208ENST00000473711 TMEM165Q9HC07 324 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 Q9N2K0 584 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 C12orf4Q9NQ89 552 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 FBXO9Q9UK97 447 aaPredicted RBP8.99□□□□□ -0.97
SP140-208ENST00000473711 EDARQ9UNE0 448 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 PPIAL4AQ9Y536 164 aa8.99□□□□□ -0.97
SP140-208ENST00000473711 TRAV6A0A075B6T7 132 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 TRAV39A0A0B4J263 110 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 FUOMA2VDF0 154 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 OOEPA6NGQ2 149 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 LGALS8O00214 317 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 SDCBPO00560 298 aaPredicted RBP8.98□□□□□ -0.97
SP140-208ENST00000473711 GOSR1O95249 250 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 NAPSAO96009 420 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 TCRBP04435 133 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 IFNA6P05013 189 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 GSTT2P0CG29 244 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 MDH2P40926 338 aaKnown RBP8.98□□□□□ -0.97
SP140-208ENST00000473711 OR3A1P47881 315 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 ARPC4P59998 168 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 TLE4Q04727 773 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 MEF2DQ14814 521 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 HFEQ30201 348 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 SCGB2B2Q4G0G5 96 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 ACTBL2Q562R1 376 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 RSBN1Q5VWQ0 802 aaPredicted RBP8.98□□□□□ -0.97
SP140-208ENST00000473711 TEX36Q5VZQ5 186 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 C20orf204Q6ZNR8 217 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 C17orf107Q6ZR85 190 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 ASCC1Q8N9N2 400 aaKnown RBP8.98□□□□□ -0.97
SP140-208ENST00000473711 OR5AP2Q8NGF4 316 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 ANGPTL6Q8NI99 470 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 NEU4Q8WWR8 484 aaPredicted RBP8.98□□□□□ -0.97
SP140-208ENST00000473711 SNX22Q96L94 193 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 CCL13Q99616 98 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 SHARPINQ9H0F6 387 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 ZNF286AQ9HBT8 521 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 ANXA10Q9UJ72 324 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 ZNF222Q9UK12 451 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 NUBP2Q9Y5Y2 271 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 COL12A1Q99715 3063 aa8.98□□□□□ -0.97
SP140-208ENST00000473711 PTPN13Q12923 2485 aa8.97□□□□□ -0.97
SP140-208ENST00000473711 DYSFO75923 2080 aa8.97□□□□□ -0.97
SP140-208ENST00000473711 TRAV38-1A0A0B4J264 116 aa8.97□□□□□ -0.97
SP140-208ENST00000473711 TMEM30CPA0ZSE6 113 aa8.97□□□□□ -0.97
SP140-208ENST00000473711 CLEC18AA5D8T8 446 aa8.97□□□□□ -0.97
SP140-208ENST00000473711 INMT-MINDY4F8WBC2 141 aa8.97□□□□□ -0.97
SP140-208ENST00000473711 LY6HO94772 140 aa8.97□□□□□ -0.97
SP140-208ENST00000473711 H2AFB2P0C5Z0 115 aa8.97□□□□□ -0.97
SP140-208ENST00000473711 COX6B1P14854 86 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms