RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 WFDC12Q8WWY7 111 aa9.36□□□□□ -0.91
CPNE1-222ENST00000473373 TFAP2CQ92754 450 aa9.36□□□□□ -0.91
CPNE1-222ENST00000473373 MALSU1Q96EH3 234 aa9.36□□□□□ -0.91
CPNE1-222ENST00000473373 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
CPNE1-222ENST00000473373 MEGF9Q9H1U4 602 aa9.36□□□□□ -0.91
CPNE1-222ENST00000473373 TCF7L1Q9HCS4 588 aa9.36□□□□□ -0.91
CPNE1-222ENST00000473373 PLCXD1Q9NUJ7 323 aa9.36□□□□□ -0.91
CPNE1-222ENST00000473373 TAS2R3Q9NYW6 316 aa9.36□□□□□ -0.91
CPNE1-222ENST00000473373 MRPS28Q9Y2Q9 187 aaKnown RBP9.36□□□□□ -0.91
CPNE1-222ENST00000473373 PKD1L1Q8TDX9 2849 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 ZNF729A6NN14 1252 aaPredicted RBP9.35□□□□□ -0.91
CPNE1-222ENST00000473373 ZNF780AO75290 641 aaPredicted RBP9.35□□□□□ -0.91
CPNE1-222ENST00000473373 CSN2P05814 226 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 CDK1P06493 297 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 HSMCR30P0CW71 290 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 GTF2F2P13984 249 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 HTR1DP28221 377 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 CEACAM3P40198 252 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 PRRX1P54821 245 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 C6orf141Q5SZD1 244 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 MINOS1Q5TGZ0 78 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 ELP2Q6IA86 826 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 Q6P435 159 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 Q6ZSV7 163 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 TCF23Q7RTU1 214 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 C11orf42Q8N5U0 333 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 NANOGP1Q8N7R0 232 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 OR11H6Q8NGC7 330 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 LINC01006Q8NI28 216 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 MUL1Q969V5 352 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 TMED9Q9BVK6 235 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 PPIL3Q9H2H8 161 aaKnown RBP9.35□□□□□ -0.91
CPNE1-222ENST00000473373 KIF25Q9UIL4 384 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 MINOS1-NBL1R4GNA1 71 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 MGAM2Q2M2H8 2515 aa9.35□□□□□ -0.91
CPNE1-222ENST00000473373 TRBV5-5A0A0J9YX44 114 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 M0QZ24 198 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 LMO1P25800 156 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 BRS3P32247 399 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 KCNJ3P48549 501 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 HSPA13P48723 471 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 RAB13P51153 203 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 RBM11P57052 281 aaKnown RBP9.34□□□□□ -0.91
CPNE1-222ENST00000473373 SRSF4Q08170 494 aaKnown RBP9.34□□□□□ -0.91
CPNE1-222ENST00000473373 DOC2BQ14184 412 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 AANATQ16613 207 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 RBM48Q5RL73 367 aaKnown RBP9.34□□□□□ -0.91
CPNE1-222ENST00000473373 SLC35E4Q6ICL7 350 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 HEPN1Q6WQI6 88 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 Q6ZTK2 550 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 LINC00596Q86U02 117 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 RTN4RL2Q86UN3 420 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 TMEM219Q86XT9 240 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 NKAIN3Q8N8D7 197 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 SUMF2Q8NBJ7 301 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 OR51T1Q8NGJ9 327 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 MRGPRDQ8TDS7 321 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 UFD1Q92890 307 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 CREB3L1Q96BA8 519 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 COQ2Q96H96 371 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 PGLYRP3Q96LB9 341 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 CNBD2Q96M20 576 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 DPCDQ9BVM2 203 aaPredicted RBP9.34□□□□□ -0.91
CPNE1-222ENST00000473373 FOXJ3Q9UPW0 622 aa9.34□□□□□ -0.91
CPNE1-222ENST00000473373 TRAV8-7A0A075B6U6 113 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 ODF3BA8MYP8 253 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 LEUTXA8MZ59 168 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 GEMIN2O14893 280 aaKnown RBP9.33□□□□□ -0.92
CPNE1-222ENST00000473373 RGS10O43665 173 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 CRTAPO75718 401 aaPredicted RBP9.33□□□□□ -0.92
CPNE1-222ENST00000473373 VSIG10L2P0DP72 767 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 FSTP19883 344 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 MNDAP41218 407 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 GNG10P50151 68 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 DEFA6Q01524 100 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 SPHARQ15513 63 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 MPV17LQ2QL34 196 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 PDLIM3Q53GG5 364 aaPredicted RBP9.33□□□□□ -0.92
CPNE1-222ENST00000473373 ZNF529Q6P280 563 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 GLIPR1L1Q6UWM5 242 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 DERL3Q96Q80 235 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 CALYQ9NYX4 217 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 DPM3Q9P2X0 92 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 TCF19Q9Y242 345 aa9.33□□□□□ -0.92
CPNE1-222ENST00000473373 AMMECR1Q9Y4X0 333 aaPredicted RBP9.33□□□□□ -0.92
CPNE1-222ENST00000473373 TGP01266 2768 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 TRAV24A0A0B4J272 114 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 KBTBD11-OT1A0A1B0GTJ5 212 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 TMEM30CPA0ZSE6 113 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 MAGEA13PA6NCF6 341 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 MCRIP1C9JLW8 97 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 MMP23AO75900 390 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 TSPAN9O75954 239 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 IGHV3-7P01780 117 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 IGFBP3P17936 291 aaPredicted RBP9.32□□□□□ -0.92
CPNE1-222ENST00000473373 BDH1Q02338 343 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 GPR50Q13585 617 aa9.32□□□□□ -0.92
CPNE1-222ENST00000473373 ACSM3Q53FZ2 586 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms