RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 WDR13Q9H1Z4 485 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 PPA2Q9H2U2 334 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 TMEM165Q9HC07 324 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 Q9N2K0 584 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 CBLN4Q9NTU7 201 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 EHFQ9NZC4 300 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 OR14J1Q9UGF5 321 aa10.79□□□□□ -0.68
VPS13D-205ENST00000473099 ZNF230Q9UIE0 474 aaPredicted RBP10.79□□□□□ -0.68
VPS13D-205ENST00000473099 PTPN13Q12923 2485 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 C7orf66A4D0T2 115 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 RFPL4AA6NLU0 287 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 OR2AT4A6NND4 320 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 RFPL4AL1F8VTS6 287 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 PMP2P02689 132 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 IL5P05113 134 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 CSN2P05814 226 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 TRAPPC2P0DI81 140 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 TRAPPC2BP0DI82 140 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 PSG2P11465 335 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 GMFBP60983 142 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 CCL8P80075 99 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 SCGB2B2Q4G0G5 96 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 METTL11BQ5VVY1 283 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 ZNF880Q6PDB4 577 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 ZNF497Q6ZNH5 498 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 OVCH2Q7RTZ1 564 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 CADM3Q8N126 398 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 TERB2Q8NHR7 220 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 MED30Q96HR3 178 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 DNTTIP1Q9H147 329 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 GPN1Q9HCN4 374 aaPredicted RBP10.78□□□□□ -0.68
VPS13D-205ENST00000473099 MYOZ1Q9NP98 299 aaPredicted RBP10.78□□□□□ -0.68
VPS13D-205ENST00000473099 DOPEY1Q5JWR5 2465 aa10.78□□□□□ -0.68
VPS13D-205ENST00000473099 TRAV38-1A0A0B4J264 116 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 TMEM30CPA0ZSE6 113 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.77□□□□□ -0.69
VPS13D-205ENST00000473099 HSPB6O14558 160 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 ARPC1BO15143 372 aaKnown RBP10.77□□□□□ -0.69
VPS13D-205ENST00000473099 DIRAS3O95661 229 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 EGR1P18146 543 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 PRDX2P32119 198 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 GLP1RP43220 463 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 SURF2Q15527 256 aaPredicted RBP10.77□□□□□ -0.69
VPS13D-205ENST00000473099 KCNJ8Q15842 424 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 TEX36Q5VZQ5 186 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 SLC35E4Q6ICL7 350 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 TRAT1Q6PIZ9 186 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 MEX3BQ6ZN04 569 aaKnown RBP10.77□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF554Q86TJ5 538 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF561Q8N587 486 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 OR5D13Q8NGL4 314 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 OR6F1Q8NGZ6 308 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 MRPL30Q8TCC3 161 aaKnown RBP10.77□□□□□ -0.69
VPS13D-205ENST00000473099 DYRK2Q92630 601 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 SNX22Q96L94 193 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 RAB1BQ9H0U4 201 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 ALX4Q9H161 411 aaPredicted RBP10.77□□□□□ -0.69
VPS13D-205ENST00000473099 LRRK2Q5S007 2527 aa10.77□□□□□ -0.69
VPS13D-205ENST00000473099 TMEM82A0PJX8 343 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 FAM221AA4D161 298 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 OOEPA6NGQ2 149 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 A6NNC1 897 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 CEACAM18A8MTB9 384 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 TRDCB7Z8K6 153 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 TAS2R31P59538 309 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 UBE2MP61081 183 aaKnown RBP10.76□□□□□ -0.69
VPS13D-205ENST00000473099 HLA-DRB3P79483 266 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 COL10A1Q03692 680 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 SPRNQ5BIV9 151 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 DTX2Q86UW9 622 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 LHFPL1Q86WI0 220 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 BOLLQ8N9W6 283 aaKnown RBP10.76□□□□□ -0.69
VPS13D-205ENST00000473099 OR4A4PQ8NGN8 299 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 OR13C8Q8NGS7 320 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 GIMAP1Q8WWP7 306 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 MAFIPQ8WZ33 124 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 SPOCK3Q9BQ16 436 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 FAM234AQ9H0X4 552 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 NCOR1P1Q9H4R4 102 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 ALG5Q9Y673 324 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 ADGRG4Q8IZF6 3080 aa10.76□□□□□ -0.69
VPS13D-205ENST00000473099 YLPM1P49750 1951 aaKnown RBP10.76□□□□□ -0.69
VPS13D-205ENST00000473099 IGKV1D-17A0A075B6S4 117 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 A0A0B4J293 547 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 IGHV1-69-2A0A0G2JMI3 117 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 HMX3A6NHT5 357 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 NKX6-3A6NJ46 265 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 SNRPGP15A8MWD9 76 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 TMEM178BH3BS89 294 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 C19orf84I3L1E1 186 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 LGALS8O00214 317 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 MGST3O14880 152 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 FABP7O15540 132 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 FSTL3O95633 263 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 RLN1P04808 185 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 OR5H8P0DN80 308 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 FPR2P25090 351 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 CD80P33681 288 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 GABRA2P47869 451 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms