RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 IGLL1P15814 213 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 GABRB1P18505 474 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 MRPL28Q13084 256 aaKnown RBP15.76■□□□□ 0.11
COL9A3-210ENST00000472880 CDK5R1Q15078 307 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 C9orf152Q5JTZ5 239 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 ZNF691Q5VV52 312 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 FOXB2Q5VYV0 432 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 LPCAT4Q643R3 524 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 OR9G1Q8NH87 305 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 OR5AK2Q8NH90 309 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 MYDGFQ969H8 173 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 TOMM40LQ969M1 308 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 FAM118AQ9NWS6 357 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 AMMECR1Q9Y4X0 333 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-210ENST00000472880 KBTBD11-OT1A0A1B0GTJ5 212 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 SH2D7A6NKC9 451 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-210ENST00000472880 ZFPL1O95159 310 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 FADS2O95864 444 aaKnown RBP15.75■□□□□ 0.11
COL9A3-210ENST00000472880 SLC35A2P78381 396 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 C17orf58Q2M2W7 97 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 PAN3Q58A45 887 aaKnown RBP15.75■□□□□ 0.11
COL9A3-210ENST00000472880 TCTEX1D4Q5JR98 221 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 PARP16Q8N5Y8 322 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 WFDC9Q8NEX5 89 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 OR51T1Q8NGJ9 327 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 RPEQ96AT9 228 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 KIRREL1Q96J84 757 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 Q96MT0 163 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 RDH12Q96NR8 316 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 NR1H4Q96RI1 486 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-210ENST00000472880 ISG20L2Q9H9L3 353 aaKnown RBP15.75■□□□□ 0.11
COL9A3-210ENST00000472880 PCDHB16Q9NRJ7 776 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 INPP5EQ9NRR6 644 aa15.75■□□□□ 0.11
COL9A3-210ENST00000472880 SMPD3Q9NY59 655 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-210ENST00000472880 KIAA2026Q5HYC2 2103 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 MEIKINA0A087WXM9 373 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 ANKRD65E5RJM6 399 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 LY6LH3BQJ8 138 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 MAGEB3O15480 346 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 MPZL2O60487 215 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 CLIC3O95833 236 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 FAM106CPP0CH98 169 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 RCN1Q15293 331 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 ZNF565Q8N9K5 539 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 RHOXF1Q8NHV9 184 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 GPER1Q99527 375 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 PDCD1LG2Q9BQ51 273 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 FAM192AQ9GZU8 254 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 ERVK13-1Q9NX77 482 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 CALYQ9NYX4 217 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 KIF25Q9UIL4 384 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 MOB4Q9Y3A3 225 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 HSPE1-MOB4S4R3N1 261 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 NOTCH3Q9UM47 2321 aa15.74■□□□□ 0.11
COL9A3-210ENST00000472880 AMY1AP04745 511 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 AMY2AP04746 511 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 RAB3AP20336 220 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 GBX2P52951 348 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-210ENST00000472880 ELP2Q6IA86 826 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 PXT1Q8NFP0 134 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 OR13A1Q8NGR1 328 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 TNFAIP8L1Q8WVP5 186 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 BARHL1Q9BZE3 327 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 AMBNQ9NP70 447 aa15.73■□□□□ 0.11
COL9A3-210ENST00000472880 E9PI62 339 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 GABRPO00591 440 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 IL1AP01583 271 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 C21orf33P30042 268 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-210ENST00000472880 RAB40BQ12829 278 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 IL13RA2Q14627 380 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 LRRC36Q1X8D7 754 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 UTF1Q5T230 341 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 C10orf99Q6UWK7 81 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 SATL1Q86VE3 508 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 OSR2Q8N2R0 312 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 ZNF555Q8NEP9 628 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 OR56B4Q8NH76 319 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 CNIH3Q8TBE1 160 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 HAVCR2Q8TDQ0 301 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 IDI2-AS1Q9NZ38 188 aa15.72■□□□□ 0.11
COL9A3-210ENST00000472880 TRAV24A0A0B4J272 114 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 J3QR06 171 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 MPIG6BO95866 241 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 IGHV3-7P01780 117 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 SNRNP70P08621 437 aaKnown RBP15.71■□□□□ 0.11
COL9A3-210ENST00000472880 HES1Q14469 280 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 RSU1Q15404 277 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 LTC4SQ16873 150 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 LEAP2Q969E1 77 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 RCC1LQ96I51 464 aaKnown RBP15.71■□□□□ 0.11
COL9A3-210ENST00000472880 NCOR1P1Q9H4R4 102 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 C8orf4Q9NR00 106 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 ZNF281Q9Y2X9 895 aa15.71■□□□□ 0.11
COL9A3-210ENST00000472880 PSMB11A5LHX3 300 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 DUS4LO95620 317 aaKnown RBP15.7■□□□□ 0.1
COL9A3-210ENST00000472880 CD2P06729 351 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 CGB3P0DN86 165 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 CGB7P0DN87 165 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 SOX2P48431 317 aa15.7■□□□□ 0.1
COL9A3-210ENST00000472880 KCNJ3P48549 501 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms