RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 A8MWP6 167 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 M0R1B8 84 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 OR8G3PP0DMU2 310 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 PMCHP20382 165 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 MSR1P21757 451 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 P2RY2P41231 377 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 OR2B6P58173 313 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 RPL31P62899 125 aaKnown RBP0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 ACTBL2Q562R1 376 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 SYT6Q5T7P8 510 aaPredicted RBP0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 NXNL2Q5VZ03 156 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 TPGS1Q6ZTW0 290 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 OR2W3Q7Z3T1 314 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 NIT1Q86X76 327 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 KRTCAP2Q8N6L1 136 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 KCTD4Q8WVF5 259 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 PIH1D2Q8WWB5 315 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 TFGQ92734 400 aaPredicted RBP0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 TMBIM1Q969X1 311 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 ANP32EQ9BTT0 268 aa0.3□□□□□ -2.36
PRPF40A-207ENST00000471701 ARAP3Q8WWN8 1544 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 PHGR1C9JFL3 82 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 M0QXV9 152 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 UPK2O00526 184 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 CRYGDP07320 174 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 CECR9P0C854 216 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 PRTN3P24158 256 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 PEBP1P30086 187 aaKnown RBP0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 SLC35B1P78383 322 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 LCN2P80188 198 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 MMDQ15546 238 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 OR8G1Q15617 311 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 CEACAM16Q2WEN9 425 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 IDNKQ5T6J7 187 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 UGT2A3Q6UWM9 527 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 COA5Q86WW8 74 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 ZFAND2AQ8N6M9 145 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 ERMNQ8TAM6 284 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 CD200R1Q8TD46 325 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 PEX13Q92968 403 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 CLSTN2Q9H4D0 955 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 WDR55Q9H6Y2 383 aaPredicted RBP0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 RAB20Q9NX57 234 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 DOK5Q9P104 306 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 AP3M1Q9Y2T2 418 aa0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 SOX21Q9Y651 276 aaPredicted RBP0.29□□□□□ -2.36
PRPF40A-207ENST00000471701 FN1P02751 2386 aaKnown RBP0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 YLPM1P49750 1951 aaKnown RBP0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 ZNF638Q14966 1978 aaKnown RBP0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 A0A1B0GVG6 124 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 A0A1B0GXF2 115 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 ARRDC5A6NEK1 342 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 RBFOX3A6NFN3 312 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 GOLGA8TH3BQL2 631 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 H7C2Y5 167 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 TCAPO15273 167 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 SOD1P00441 154 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 LIPCP11150 499 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 RALBP11234 206 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 ALOX5APP20292 161 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 XKP51811 444 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 CTAG1AP78358 180 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 TSPAN31Q12999 210 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 WDR43Q15061 677 aaKnown RBP eCLIP0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 TIMM23BQ5SRD1 257 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 SDIM1Q6ZPB5 146 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 KATNAL2Q8IYT4 538 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 GAPTQ8N292 157 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 TMIGD2Q96BF3 282 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 Q9BRP9 147 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 TIMM21Q9BVV7 248 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 ALX4Q9H161 411 aaPredicted RBP0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 OR2AG1Q9H205 316 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 C8orf33Q9H7E9 229 aaPredicted RBP0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 MRPL22Q9NWU5 206 aaKnown RBP0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 PEF1Q9UBV8 284 aaKnown RBP0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 WDR19Q8NEZ3 1342 aa0.28□□□□□ -2.36
PRPF40A-207ENST00000471701 IGKV1-12A0A0C4DH73 117 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 CTAGE15A4D2H0 777 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 ARGFXA6NJG6 315 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 H3BP45 60 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 ALOX12BO75342 701 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 IGKV1D-12P01611 117 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 RWDD2BP57060 319 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 BEX3Q00994 111 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 ZNF117Q03924 483 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 FAM201AQ5SY85 155 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 MRPL21Q7Z2W9 205 aaKnown RBP0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 CTAGE6Q86UF2 777 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 PDCD6IPQ8WUM4 868 aaKnown RBP0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 TAPBPLQ9BX59 468 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 FBXL3Q9UKT7 428 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 NRCAMQ92823 1304 aa0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 USP42Q9H9J4 1324 aaKnown RBP0.27□□□□□ -2.37
PRPF40A-207ENST00000471701 IGKV2-40A0A087WW87 121 aaPredicted RBP0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 TRAV8-3A0A0A6YYJ7 113 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 PGPA6NDG6 321 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 WRBO00258 174 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 MYO1DO94832 1006 aa0.26□□□□□ -2.37
PRPF40A-207ENST00000471701 IGKV2D-40P01614 121 aaPredicted RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms