RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 IL36GQ9NZH8 169 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 ZNF732B4DXR9 585 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 ATXN7O15265 892 aaPredicted RBP11.35□□□□□ -0.59
SFXN3-205ENST00000470252 ZIC3O60481 467 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 LIFP15018 202 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 B4GALT1P15291 398 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 RELQ04864 619 aaPredicted RBP11.35□□□□□ -0.59
SFXN3-205ENST00000470252 EXT1Q16394 746 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 ZNF506Q5JVG8 444 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 SPNS3Q6ZMD2 512 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 BEND4Q6ZU67 534 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 P4HA3Q7Z4N8 544 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 CPNE4Q96A23 557 aaPredicted RBP11.35□□□□□ -0.59
SFXN3-205ENST00000470252 GNPNAT1Q96EK6 184 aaPredicted RBP11.35□□□□□ -0.59
SFXN3-205ENST00000470252 TMEM56Q96MV1 263 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 PCED1AQ9H1Q7 454 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 PPP1R14DQ9NXH3 145 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 TMEM56-RWDD3S4R434 201 aa11.35□□□□□ -0.59
SFXN3-205ENST00000470252 BCAT2O15382 392 aaPredicted RBP11.34□□□□□ -0.59
SFXN3-205ENST00000470252 CYB5BO43169 146 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 HSPB1P04792 205 aaKnown RBP11.34□□□□□ -0.59
SFXN3-205ENST00000470252 CST2P09228 141 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 DSCR4P56555 118 aaPredicted RBP11.34□□□□□ -0.59
SFXN3-205ENST00000470252 RPL23AP62750 156 aaKnown RBP11.34□□□□□ -0.59
SFXN3-205ENST00000470252 ZNF92Q03936 586 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 CALHM1Q8IU99 346 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 ODF3L1Q8IXM7 274 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 ZNF383Q8NA42 475 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 ZNF154Q13106 437 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 ZNF818PQ6ZRF7 136 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 CMTM1Q8IZ96 169 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 NAT6Q93015 286 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 ALKBH3Q96Q83 286 aaPredicted RBP11.34□□□□□ -0.59
SFXN3-205ENST00000470252 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 FAM86C1Q9NVL1 165 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 TMEM38BQ9NVV0 291 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 PARPBPQ9NWS1 579 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 TREM2Q9NZC2 230 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 PTRH2Q9Y3E5 179 aaKnown RBP11.34□□□□□ -0.59
SFXN3-205ENST00000470252 HS3ST3B1Q9Y662 390 aa11.34□□□□□ -0.59
SFXN3-205ENST00000470252 CFAP54Q96N23 3096 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 hCG_38984A0A1B0GV85 526 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 OR6C6A6NF89 314 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 TMEM50AO95807 157 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 NPBWR2P48146 333 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 TLE4Q04727 773 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
SFXN3-205ENST00000470252 GUSBP11Q6P575 273 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 SLC25A26Q70HW3 274 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 WDR5BQ86VZ2 330 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 GAPTQ8N292 157 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 ZNF611Q8N823 705 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 OR10D4PQ8NGN7 298 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 CLDND2Q8NHS1 167 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 MAFAQ8NHW3 353 aaPredicted RBP11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 TRGC2P03986 189 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 NTF4P34130 210 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 GLIPR1P48060 266 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 CCL7P80098 99 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 PSG4Q00888 419 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 PCOLCEQ15113 449 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 PDZD11Q5EBL8 140 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 SP5Q6BEB4 398 aaPredicted RBP11.33□□□□□ -0.6
SFXN3-205ENST00000470252 EXTL1Q92935 676 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 RBMXL1Q96E39 390 aaKnown RBP11.33□□□□□ -0.6
SFXN3-205ENST00000470252 OPA3Q9H6K4 179 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 PROK2Q9HC23 129 aa11.33□□□□□ -0.6
SFXN3-205ENST00000470252 NCKAP5O14513 1909 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 A0A1W2PQM1 296 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 CXorf65A6NEN9 183 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 SEC14L6B5MCN3 397 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 RPL36A-HNRNPH2H7BZ11 118 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 CHST1O43916 411 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 TK1P04183 234 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 SRFP11831 508 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 BAXQ07812 192 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 DAZAP2Q15038 168 aaPredicted RBP11.32□□□□□ -0.6
SFXN3-205ENST00000470252 ABHD14BQ96IU4 210 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 SIGLEC12Q96PQ1 595 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 IGHV5-10-1A0A0J9YXX1 117 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 HBE1P02100 147 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 SCTP09683 121 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 RAC1P63000 192 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 NKX6-1P78426 367 aaPredicted RBP11.32□□□□□ -0.6
SFXN3-205ENST00000470252 DEFA6Q01524 100 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 ID3Q02535 119 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 NMSQ5H8A3 153 aa11.32□□□□□ -0.6
SFXN3-205ENST00000470252 GFI1BQ5VTD9 330 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms