RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 NKX3-1Q99801 234 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 SMR3AQ99954 134 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 UNKLQ9H9P5 680 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 TAS2R3Q9NYW6 316 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 NDUFA13Q9P0J0 144 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DUX4Q9UBX2 424 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 DAPK2Q9UIK4 370 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 METRNQ9UJH8 293 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 LINC00312Q9Y6C7 94 aa10.43□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF469Q96JG9 3925 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 TRGV10A0A0A0MS01 117 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 A0A1W2PP11 408 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 FCN3O75636 299 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 SELLP14151 372 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 SERPINB10P48595 397 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 EDDM3BP56851 147 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 VBP1P61758 197 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 NCS1P62166 190 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 LSM3P62310 102 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 KRBOX4Q5JUW0 171 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 NCR3LG1Q68D85 454 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF554Q86TJ5 538 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 CLVS1Q8IUQ0 354 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 UPRTQ96BW1 309 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 WDFY2Q96P53 400 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 BEX2Q9BXY8 128 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 TMPRSS13Q9BYE2 586 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 LPAR5Q9H1C0 372 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 GAL3ST2Q9H3Q3 398 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 GSX1Q9H4S2 264 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 RNF167Q9H6Y7 350 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 METTL8Q9H825 291 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 OPN4Q9UHM6 478 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 SPATA2Q9UM82 520 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 PEX16Q9Y5Y5 336 aa10.42□□□□□ -0.74
SPTLC1-204ENST00000469778 TMEM272A0A1B0GTI8 110 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 TMEM30CPA0ZSE6 113 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 ODAMA1E959 279 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 TOX4O94842 621 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 TFF1P04155 84 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF728P0DKX0 622 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 PRTN3P24158 256 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 BLVRBP30043 206 aaPredicted RBP10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 SOX6P35712 828 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 CLDN12P56749 244 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 EDDM3AQ14507 147 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 FAM120AOSQ5T036 256 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 IDNKQ5T6J7 187 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 OR10K2Q6IF99 312 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 TRAT1Q6PIZ9 186 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 METAP1DQ6UB28 335 aaPredicted RBP10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 FAM185AQ8N0U4 392 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 GAPTQ8N292 157 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 PHF21AQ96BD5 680 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 CHST6Q9GZX3 395 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 DCSTAMPQ9H295 470 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 PPA2Q9H2U2 334 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 LINC00574Q9H8X3 128 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 PLEKHJ1Q9NW61 149 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 TLN2Q9Y4G6 2542 aa10.41□□□□□ -0.74
SPTLC1-204ENST00000469778 SMIM31A0A1B0GVY4 71 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 C17orf98A8MV24 154 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 MT-ND4P03905 459 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 CLEC2LP0C7M8 214 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 SLC2A2P11168 524 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF182P17025 639 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 CHATP28329 748 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 GUCA2AQ02747 115 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 AESQ08117 197 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 TMEM30BQ3MIR4 351 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 CHRFAM7AQ494W8 412 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 SIGIRRQ6IA17 410 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 OR52W1Q6IF63 320 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF497Q6ZNH5 498 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 Q6ZTK2 550 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 OR4M1Q8NGD0 313 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 OR10A7Q8NGE5 316 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 NEK7Q8TDX7 302 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 ZNF714Q96N38 554 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 SIRPDQ9H106 197 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 HEXA-AS1Q9H8Q6 139 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 C19orf12Q9NSK7 152 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 ETAA1Q9NY74 926 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 MGAT4AQ9UM21 535 aa10.4□□□□□ -0.74
SPTLC1-204ENST00000469778 MEIKINA0A087WXM9 373 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 FOXI3A8MTJ6 420 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 SERPINE3A8MV23 424 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 ORC5O43913 435 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 CRLF1O75462 422 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 MMP9P14780 707 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 VEGFCP49767 419 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 ARF6P62330 175 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 RSBN1Q5VWQ0 802 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 MZT2AQ6P582 158 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 BPIFB2Q8N4F0 458 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 OR10R2Q8NGX6 335 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 RAB3CQ96E17 227 aa10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 S100A16Q96FQ6 103 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-204ENST00000469778 COQ2Q96H96 371 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms