RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 A0A0J9YW62 118 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 CLDN17P56750 224 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 WIPI1Q5MNZ9 446 aaPredicted RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 OR14L1PQ8NHC6 308 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 KCNG3Q8TAE7 436 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 ZNF385AQ96PM9 386 aaKnown RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 SIGLEC12Q96PQ1 595 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.04□□□□□ -0.48
GPC1-208ENST00000469694 OR14J1Q9UGF5 321 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 CBY1Q9Y3M2 126 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 NCKAP5O14513 1909 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 LRRC3CA6NJW4 275 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 TGOLN2O43493 480 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 CBR3O75828 277 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 IL18BPO95998 194 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 TTRP02766 147 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 PGA4P0DJD7 388 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 PGA3P0DJD8 388 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 RAB4AP20338 218 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 ANOS1P23352 680 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 MMP16P51512 607 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 SLC35E3Q7Z769 313 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 NIPSNAP3BQ9BS92 247 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 LRFN1Q9P244 771 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 MRPS28Q9Y2Q9 187 aaKnown RBP12.03□□□□□ -0.48
GPC1-208ENST00000469694 FAM186AA6NE01 2351 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 AQP7P3A6NL99 342 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 SRSF6Q13247 344 aaKnown RBP12.03□□□□□ -0.48
GPC1-208ENST00000469694 SLC10A1Q14973 349 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 DEGS2Q6QHC5 323 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 SNX22Q96L94 193 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 TMEM59Q9BXS4 323 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 SRXN1Q9BYN0 137 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
GPC1-208ENST00000469694 RCL1Q9Y2P8 373 aaKnown RBP12.03□□□□□ -0.48
GPC1-208ENST00000469694 A0A1W2PP11 408 aa12.02□□□□□ -0.48
GPC1-208ENST00000469694 APLNRP35414 380 aa12.02□□□□□ -0.48
GPC1-208ENST00000469694 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.02□□□□□ -0.48
GPC1-208ENST00000469694 TMEM183AQ8IXX5 376 aa12.02□□□□□ -0.48
GPC1-208ENST00000469694 CYB561D1Q8N8Q1 229 aa12.02□□□□□ -0.48
GPC1-208ENST00000469694 OR8G5Q8NG78 346 aa12.02□□□□□ -0.48
GPC1-208ENST00000469694 CRYM-AS1A6NIL9 109 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 STMND1H3BQB6 276 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 XRCC2O43543 280 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 NR2C1P13056 603 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 C21orf62-AS1Q17RA5 79 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 SULF2Q8IWU5 870 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 C1orf87Q8N0U7 546 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 NAXEQ8NCW5 288 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 NOXO1Q8NFA2 376 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 OXGR1Q96P68 337 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 ABHD14AQ9BUJ0 271 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 FAM206AQ9NX38 181 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 LIPGQ9Y5X9 500 aa12.02□□□□□ -0.49
GPC1-208ENST00000469694 PTPRZ1P23471 2315 aaPredicted RBP12.01□□□□□ -0.49
GPC1-208ENST00000469694 MARCH11A6NNE9 402 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 DIRAS3O95661 229 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 IGHG1P01857 330 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 AMBPP02760 352 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
GPC1-208ENST00000469694 CELA3AP09093 270 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 H2BFMP0C1H6 154 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 CD200P41217 278 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 B3GALT5-AS1P59052 145 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 H3F3AP84243 136 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 EIF3IQ13347 325 aaKnown RBP12.01□□□□□ -0.49
GPC1-208ENST00000469694 ICAM4Q14773 271 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 PHYHD1Q5SRE7 291 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 DNM1P34Q6PK57 102 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 SNHG12Q9BXW3 62 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 GPR87Q9BY21 358 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 WSB1Q9Y6I7 421 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 GVINP1Q7Z2Y8 2422 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 CUL9Q8IWT3 2517 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 CDRT15L2A8MXV6 281 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 B4DEV8 164 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 NEURL1O76050 574 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 SCAF4O95104 1147 aaKnown RBP12.01□□□□□ -0.49
GPC1-208ENST00000469694 CTSDP07339 412 aaPredicted RBP12.01□□□□□ -0.49
GPC1-208ENST00000469694 FTH1P19P0C7X4 201 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 OR3A4PP47883 348 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 CHRFAM7AQ494W8 412 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 SP5Q6BEB4 398 aaPredicted RBP12.01□□□□□ -0.49
GPC1-208ENST00000469694 OR10S1Q8NGN2 331 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 CEP250Q9BV73 2442 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 NPIPB13A6NJU9 1138 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 C21orf140B9A014 251 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 NPIPB4C9JG80 1138 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 MBP02144 154 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 GDF1P27539 372 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 RND2P52198 227 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 GABREP78334 506 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 HLA-DRB3P79483 266 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 TCF15Q12870 199 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 ABLIM2Q6H8Q1 611 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 PIP4P1Q86T03 277 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 VASH2Q86V25 355 aa12.01□□□□□ -0.49
GPC1-208ENST00000469694 POLR1DQ9Y2S0 133 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms