RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RPL31P62899 125 aaKnown RBP2.81□□□□□ -1.96
LSM5-209ENST00000468872 ELF3P78545 371 aaPredicted RBP2.81□□□□□ -1.96
LSM5-209ENST00000468872 C2orf54Q08AI8 447 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 C6orf183Q5T699 404 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 DUPD1Q68J44 220 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 IGFL1Q6UW32 110 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 ZCCHC24Q8N2G6 241 aaKnown RBP2.81□□□□□ -1.96
LSM5-209ENST00000468872 SLC35G3Q8N808 338 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 CYB561A3Q8NBI2 242 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 ING5Q8WYH8 240 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 Q96MT0 163 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 TSNAXQ99598 290 aaKnown RBP2.81□□□□□ -1.96
LSM5-209ENST00000468872 MAP1LC3CQ9BXW4 147 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 NRBP2Q9NSY0 501 aa2.81□□□□□ -1.96
LSM5-209ENST00000468872 KIF26AQ9ULI4 1882 aaPredicted RBP2.8□□□□□ -1.96
LSM5-209ENST00000468872 IGHV6-1A0A0B4J1U7 121 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 TRAV8-6A0A0B4J262 113 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 A0A1W2PQ67 120 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 J3QT63 122 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 LGALS9O00182 355 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 CETN3O15182 167 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 CDRT1O95170 752 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 CCL2P13500 99 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 PAX6P26367 422 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 HTR2CP28335 458 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 IFFO1Q0D2I5 559 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 SLC25A34Q6PIV7 304 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 LINC00469Q8N7U9 141 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 ST20-AS1Q8NBB2 130 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 OR4M2Q8NGB6 313 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 SFXN5Q8TD22 340 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 RMI2Q96E14 147 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 C20orf144Q9BQM9 153 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 MARVELD1Q9BSK0 173 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 ING2Q9H160 280 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 SPACA1Q9HBV2 294 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 TREM1Q9NP99 234 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 TAS2R5Q9NYW4 299 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 WIF1Q9Y5W5 379 aa2.8□□□□□ -1.96
LSM5-209ENST00000468872 NFAT5O94916 1531 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 TLN2Q9Y4G6 2542 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 EIF3AQ14152 1382 aaKnown RBP2.79□□□□□ -1.96
LSM5-209ENST00000468872 GSTTP1A0A1W2PQM5 241 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 RFXANKO14593 260 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 ZNF14P17017 642 aaPredicted RBP2.79□□□□□ -1.96
LSM5-209ENST00000468872 CELP19835 753 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 IL3RAP26951 378 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 PSMB5P28074 263 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 TAS2R43P59537 309 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 TAS2R60P59551 318 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 DNLZQ5SXM8 178 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 FAM27D1Q5T7N8 215 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 COMTD1Q86VU5 262 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 SPATA24Q86W54 205 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 LRRC52Q8N7C0 313 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 SLC25A29Q8N8R3 303 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 MNS1Q8NEH6 495 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 OR2Z1Q8NG97 314 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 SNF8Q96H20 258 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 ZFP3Q96NJ6 502 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 IP6K3Q96PC2 410 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 SCRT1Q9BWW7 348 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 PRRG3Q9BZD7 231 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 TRIM4Q9C037 500 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 ANKHQ9HCJ1 492 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 CA10Q9NS85 328 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 MARCOQ9UEW3 520 aaPredicted RBP2.79□□□□□ -1.96
LSM5-209ENST00000468872 V9GYY9 64 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 ZNF831Q5JPB2 1677 aa2.79□□□□□ -1.96
LSM5-209ENST00000468872 TGP01266 2768 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 ANKRD20A5PA0PJZ0 165 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 CENPBD1B2RD01 187 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 H7C2Y5 167 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 K7EN84 100 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 ALOX12BO75342 701 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 APOA1P02647 267 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 MMP7P09237 267 aaPredicted RBP2.78□□□□□ -1.96
LSM5-209ENST00000468872 OR5AL1P0C617 328 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 CD28P10747 220 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 NELFEP18615 380 aaKnown RBP2.78□□□□□ -1.96
LSM5-209ENST00000468872 NTF3P20783 257 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 PRSS3P35030 304 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 ERFP50548 548 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 PPP1CAP62136 330 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 TRDNQ13061 729 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 DYNC1I2Q13409 638 aaKnown RBP2.78□□□□□ -1.96
LSM5-209ENST00000468872 TAL2Q16559 108 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 PDPK2PQ6A1A2 396 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 COPS6Q7L5N1 327 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 CD302Q8IX05 232 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 STK40Q8N2I9 435 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 TRIML2Q8N7C3 387 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 SUN5Q8TC36 379 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 ZFAND1Q8TCF1 268 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 WDR34Q96EX3 536 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 GPR82Q96P67 336 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 ULBP2Q9BZM5 246 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 RBMX2Q9Y388 322 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms