RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 AESQ08117 197 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 CDK5R1Q15078 307 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 MED22Q15528 200 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 Q6P435 159 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 GPER1Q99527 375 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 NKX3-1Q99801 234 aaPredicted RBP15.4■□□□□ 0.06
COL7A1-207ENST00000467985 SIGLEC9Q9Y336 463 aa15.4■□□□□ 0.06
COL7A1-207ENST00000467985 A6NDX4 124 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 CDK2P24941 298 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 GLIPR1P48060 266 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 SOX2P48431 317 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 RAB13P51153 203 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 KRBOX4Q5JUW0 171 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 LDLRAD2Q5SZI1 272 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 RNLSQ5VYX0 342 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 ZNF773Q6PK81 442 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 SATL1Q86VE3 508 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 ABHD12Q8N2K0 398 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 NANOGP1Q8N7R0 232 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 TSPAN14Q8NG11 270 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 ZNF596Q8TC21 504 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 TNFAIP8L1Q8WVP5 186 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 RGP1Q92546 391 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-207ENST00000467985 TMEM106AQ96A25 262 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 CREB3L1Q96BA8 519 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 VCX3AQ9NNX9 186 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 BABAM2Q9NXR7 383 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 OR6C3Q9NZP0 311 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 HILPDAQ9Y5L2 63 aa15.39■□□□□ 0.05
COL7A1-207ENST00000467985 TET2Q6N021 2002 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-207ENST00000467985 A0A087WXM4 84 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 ALDOBP05062 364 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 PTGFRP43088 359 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 MAP2K4P45985 399 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 ARHGDIBP52566 201 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 TAS2R43P59537 309 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 PPP3R1P63098 170 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 BDH1Q02338 343 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 RSU1Q15404 277 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 TBCEQ15813 527 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-207ENST00000467985 PRAMEF5Q5TYX0 476 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 Q8N2B8 174 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 KLHDC1Q8N7A1 406 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 OR4D6Q8NGJ1 314 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 OR51T1Q8NGJ9 327 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 SMIM19Q96E16 107 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 DPM3Q9P2X0 92 aa15.38■□□□□ 0.05
COL7A1-207ENST00000467985 ZNF729A6NN14 1252 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-207ENST00000467985 GABRPO00591 440 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 MMP23AO75900 390 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 CSF1P09603 554 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 HSMCR30P0CW71 290 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 CEACAM3P40198 252 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 DEFA6Q01524 100 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 IL13RA2Q14627 380 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 ATXN7L3Q14CW9 347 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-207ENST00000467985 SPHARQ15513 63 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 XAF1Q6GPH4 301 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 CCBE1Q6UXH8 406 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-207ENST00000467985 ASCL4Q6XD76 172 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 TMEM219Q86XT9 240 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 ZNF565Q8N9K5 539 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 Q8NFD4 153 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 OR4P4Q8NGL7 312 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 CFHR4Q92496 578 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 COQ2Q96H96 371 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 PRSS22Q9GZN4 317 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 NCOR1P1Q9H4R4 102 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 ZNF702PQ9H963 129 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 TMEM138Q9NPI0 162 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 TAS2R4Q9NYW5 299 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 ZNF281Q9Y2X9 895 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 KIAA2026Q5HYC2 2103 aa15.37■□□□□ 0.05
COL7A1-207ENST00000467985 MEGF11A6BM72 1044 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 FAM90A22PA8MWA6 464 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 LEUTXA8MZ59 168 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 OGG1O15527 345 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 TSPAN15O95858 294 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 CD34P28906 385 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 BRS3P32247 399 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 KCNJ3P48549 501 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 PRRX1P54821 245 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 IRF3Q14653 427 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 PAN3Q58A45 887 aaKnown RBP15.36■□□□□ 0.05
COL7A1-207ENST00000467985 ZNF367Q7RTV3 350 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 SPARTQ8N0X7 666 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 OR51A2Q8NGJ7 313 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 FCGR1BQ92637 280 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 BARHL1Q9BZE3 327 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 FAM192AQ9GZU8 254 aa15.36■□□□□ 0.05
COL7A1-207ENST00000467985 A0A087X0M5 115 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 PNMA8CA0A1B0GUJ8 204 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 A0A1B0GX30 115 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 MAGEA13PA6NCF6 341 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 TOR1AO14656 332 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 KCNAB3O43448 404 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 IGLV1-47P01700 117 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 VSIG10L2P0DP72 767 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 PAX5Q02548 391 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 C16orf82Q7Z2V1 217 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 395.3 ms