RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ITGB1BP1O14713 200 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 FABP7O15540 132 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 CALUO43852 315 aaPredicted RBP2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 PDCD6O75340 191 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 KLHL2O95198 593 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 M6PRP20645 277 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 TSPOP30536 169 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 UGT2B10P36537 528 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF83P51522 516 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 TPM4P67936 248 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 FMODQ06828 376 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 PMS2P3Q13401 168 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 FLOT2Q14254 428 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 LDLRAD2Q5SZI1 272 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 LINC00304Q8N9R0 145 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR2M3Q8NG83 312 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 PHF10Q8WUB8 498 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 TWIST2Q8WVJ9 160 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR5P2Q8WZ92 322 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 TVP23CQ96ET8 276 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 PYURFQ96I23 114 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF514Q96K75 400 aaPredicted RBP2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 PLA2G12AQ9BZM1 189 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 MFSD1Q9H3U5 465 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 DSN1Q9H410 356 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 DUSP21Q9H596 190 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 IFT46Q9NQC8 304 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 PUS1Q9Y606 427 aaKnown RBP eCLIP2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 ATRNO75882 1429 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 SPATA31E1Q6ZUB1 1445 aa2.24□□□□□ -2.05
CDC42BPA-211ENST00000466538 POLR3AO14802 1390 aaPredicted RBP2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 NID2Q14112 1375 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 ABCB11O95342 1321 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 NUP153P49790 1475 aaKnown RBP2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 IGKV1OR2-108A0A075B7D4 117 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 C15orf65H3BRN8 121 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 GOLGA8RI6L899 631 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 M0QXV9 152 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 ISLRO14498 428 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 TCF21O43680 179 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 ENTPD6O75354 484 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 CA2P00918 260 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 IGKV5-2P06315 115 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 TPM3P06753 285 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 GP1BAP07359 652 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 GTF2F2P13984 249 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 CBX5P45973 191 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 HAAOP46952 286 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 EMP2P54851 167 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 SKP1P63208 163 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 TPBGQ13641 420 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 FAM162BQ5T6X4 162 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 DPPA2Q7Z7J5 298 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 SLC25A45Q8N413 288 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 FAM45AQ8TCE6 357 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 C2orf15Q8WU43 125 aaKnown RBP2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 PARD6GQ9BYG4 376 aaPredicted RBP2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 UPF3BQ9BZI7 483 aaKnown RBP2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 HDHD2Q9H0R4 259 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 UCK1Q9HA47 277 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 IMP3Q9NV31 184 aaKnown RBP2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 SNX24Q9Y343 169 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 PLXNB3Q9ULL4 1909 aa2.23□□□□□ -2.05
CDC42BPA-211ENST00000466538 THADAQ6YHU6 1953 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 A0A1B0GX12 115 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 F5H5P2 479 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 SNAP29O95721 258 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF35P13682 527 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 AQP5P55064 265 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 UBE2G2P60604 165 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 PRDX1Q06830 199 aaKnown RBP2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ANGPT1Q15389 498 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 BCL2A1Q16548 175 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 TMEM249Q2WGJ8 235 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 SPIN3Q5JUX0 258 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 NXNL2Q5VZ03 156 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 Q6ZQT7 251 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 SSX7Q7RTT5 188 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZFP82Q8N141 532 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF664Q8N3J9 261 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 BPIFB6Q8NFQ5 453 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 OR2K2Q8NGT1 345 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 DTD1Q8TEA8 209 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ANKRD7Q92527 254 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 GTF2H4Q92759 462 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 PPWD1Q96BP3 646 aaKnown RBP2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 LINC01587Q99440 93 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 TM2D3Q9BRN9 247 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ULBP1Q9BZM6 244 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ZNF436Q9C0F3 470 aaPredicted RBP2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ABCG5Q9H222 651 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 TXNIPQ9H3M7 391 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 ICOSQ9Y6W8 199 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 MIA3Q5JRA6 1907 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 DYSFO75923 2080 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 MYO15BQ96JP2 1530 aa2.22□□□□□ -2.05
CDC42BPA-211ENST00000466538 RAD50Q92878 1312 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 TRAV8-2A0A0B4J237 113 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 D6RAR5 112 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms