RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 RNF167Q9H6Y7 350 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 HEXA-AS1Q9H8Q6 139 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 ZNF391Q9UJN7 358 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 SLC22A13Q9Y226 551 aa11.74□□□□□ -0.53
HMGXB4-206ENST00000466438 TRAV1-2A0A0B4J238 106 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 A0A0U1RQV5 110 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 PDCD5O14737 125 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 TTRP02766 147 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 NDUFB7P17568 137 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 CFL1P23528 166 aaKnown RBP11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 TGFBR1P36897 503 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 RORCP51449 518 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 LHFPL4Q7Z7J7 247 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 C11orf53Q8IXP5 236 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 OR8B12Q8NGG6 310 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 OR13C3Q8NGS6 347 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 RGP1Q92546 391 aaPredicted RBP11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 AP3S1Q92572 193 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 FOXRED1Q96CU9 486 aaPredicted RBP11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 DERL3Q96Q80 235 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 RGCCQ9H4X1 137 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 CKLFQ9UBR5 152 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 SMAD5-AS1Q9Y6J3 95 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 A3GALT2U3KPV4 340 aa11.73□□□□□ -0.53
HMGXB4-206ENST00000466438 TBX1O43435 398 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 SYT7O43581 403 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 LCATP04180 440 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 SDC2P34741 201 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 MYCNOSP40205 109 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 INSL4Q14641 139 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 C10orf99Q6UWK7 81 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 WDR82Q6UXN9 313 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 OR5T2Q8NGG2 359 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 TMEM106AQ96A25 262 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 SLC25A46Q96AG3 418 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 MED30Q96HR3 178 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 P2RX4Q99571 388 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 ZMAT4Q9H898 229 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 PLEKHA1Q9HB21 404 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 SNTG1Q9NSN8 517 aa11.72□□□□□ -0.53
HMGXB4-206ENST00000466438 GGT3PA6NGU5 568 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 XRCC2O43543 280 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 TMEM127O75204 238 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 MTRF1O75570 445 aaKnown RBP11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 SLC2A1P11166 492 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 FSTP19883 344 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 RAB3BP20337 219 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 CCL1P22362 96 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 COX7A1P24310 79 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 RPS19P39019 145 aaKnown RBP11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 ECI1P42126 302 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 SOX2P48431 317 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 DYNLT3P51808 116 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 LUMP51884 338 aaPredicted RBP11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 MXD1Q05195 221 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 LINC00299Q6ZSB3 139 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 WDR86Q86TI4 376 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 NAA40Q86UY6 237 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 FAM185AQ8N0U4 392 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 MCFD2Q8NI22 146 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 ITFG2Q969R8 447 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 OPA3Q9H6K4 179 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 N6AMT1Q9Y5N5 214 aa11.71□□□□□ -0.53
HMGXB4-206ENST00000466438 TRBV5-7A0A0A0MS05 114 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 SIGLEC5O15389 551 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 ZNF20P17024 532 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 SRMP19623 302 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 AZGP1P25311 298 aaKnown RBP11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 SLC6A1P30531 599 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 PSMD7P51665 324 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 PPP3R1P63098 170 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 ZNF92Q03936 586 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 GFOD2Q3B7J2 385 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 PRSS45Q7RTY3 260 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 RDH10Q8IZV5 341 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 OR51A4Q8NGJ6 313 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 OR51E1Q8TCB6 317 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 C10orf35Q96D05 121 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 MALSU1Q96EH3 234 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 SLIRPQ9GZT3 109 aaKnown RBP11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 EDA2RQ9HAV5 297 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 ELL3Q9HB65 397 aaPredicted RBP11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 GPR84Q9NQS5 396 aa11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 TBL2Q9Y4P3 447 aaKnown RBP11.7□□□□□ -0.54
HMGXB4-206ENST00000466438 A0A075B6Q4 140 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 ANXA2P2A6NMY6 339 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 DHRS7CA6NNS2 312 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 RHBDL1O75783 438 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 DHRS3O75911 302 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 S100A5P33763 92 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 RANBP1P43487 201 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 RPL23AP62750 156 aaKnown RBP11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 SSX2Q16385 188 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 FAM27D1Q5T7N8 215 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 C9orf66Q5T8R8 295 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 C8orf86Q6ZUL3 223 aa11.69□□□□□ -0.54
HMGXB4-206ENST00000466438 SERPINA12Q8IW75 414 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms