RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ZCWPW2Q504Y3 356 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 NXNL2Q5VZ03 156 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 HBMQ6B0K9 141 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 SSX6Q7RTT6 188 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 MAL2Q969L2 176 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 CMBLQ96DG6 245 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 ZMYND19Q96E35 227 aaPredicted RBP1.75□□□□□ -2.13
LRCH3-211ENST00000466054 C20orf166-AS1Q96NR2 134 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 LINC01587Q99440 93 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 OR5V1Q9UGF6 321 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 CYB5R1Q9UHQ9 305 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 USH1CQ9Y6N9 552 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 PCNX2A6NKB5 2137 aa1.75□□□□□ -2.13
LRCH3-211ENST00000466054 MGAT4DA6NG13 374 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 H3BP45 60 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 I3L4J1 428 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 hCG_2039718K7EN88 272 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 NDUFS8O00217 210 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 PDCD6O75340 191 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 CA2P00918 260 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 CCDC172P0C7W6 258 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 PSKH1P11801 424 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 CBR1P16152 277 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 PSMB9P28065 219 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 RPA3P35244 121 aaPredicted RBP1.74□□□□□ -2.13
LRCH3-211ENST00000466054 PLTPP55058 493 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 HBG1P69891 147 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 HBG2P69892 147 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 C18orf21Q32NC0 220 aaPredicted RBP1.74□□□□□ -2.13
LRCH3-211ENST00000466054 LAMTOR1Q6IAA8 161 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 MARCH3Q86UD3 253 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 NIT1Q86X76 327 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 HS3ST5Q8IZT8 346 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 SLC25A45Q8N413 288 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 FER1L6-AS1Q8NA97 138 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 OR8K1Q8NGG5 319 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 B9D2Q9BPU9 175 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 RAB1BQ9H0U4 201 aa1.74□□□□□ -2.13
LRCH3-211ENST00000466054 FCGBPQ9Y6R7 5405 aaPredicted RBP1.74□□□□□ -2.13
LRCH3-211ENST00000466054 A6NED7 52 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 G3V3Q6 166 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 PLPP3O14495 311 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 SOX14O95416 240 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 GUSBP08236 651 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 RAB25P57735 213 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 CST6Q15828 149 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 LAIR2Q6ISS4 152 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 RBM45Q8IUH3 476 aaKnown RBP1.73□□□□□ -2.13
LRCH3-211ENST00000466054 C10orf107Q8IVU9 208 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 ZIC4Q8N9L1 334 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 LRRC20Q8TCA0 184 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 OR8B2Q96RD0 313 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 HINT2Q9BX68 163 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 GOLPH3Q9H4A6 298 aa1.73□□□□□ -2.13
LRCH3-211ENST00000466054 RBMX2Q9Y388 322 aaKnown RBP1.73□□□□□ -2.13
LRCH3-211ENST00000466054 FBN1P35555 2871 aaKnown RBP1.73□□□□□ -2.13
LRCH3-211ENST00000466054 ARAP3Q8WWN8 1544 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 RAB19A4D1S5 217 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 TMEM250H0YL14 139 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 CDIPTO14735 213 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 SH2D1AO60880 128 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 IGKV5-2P06315 115 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 IVLP07476 585 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 TSPOP30536 169 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 CBX5P45973 191 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 XIAPP98170 497 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 TRAM1Q15629 374 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 TRIP13Q15645 432 aaPredicted RBP1.72□□□□□ -2.13
LRCH3-211ENST00000466054 CEACAM21Q3KPI0 293 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 Q6ZT83 130 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 CLDN23Q96B33 292 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 MSANTD3Q96H12 275 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 CPB2Q96IY4 423 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 MFSD1Q9H3U5 465 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 TMBIM4Q9HC24 238 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 CLEC2DQ9UHP7 191 aa1.72□□□□□ -2.13
LRCH3-211ENST00000466054 YLPM1P49750 1951 aaKnown RBP1.72□□□□□ -2.13
LRCH3-211ENST00000466054 ITGB4P16144 1822 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 A0A1W2PRG6 482 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 GOLGA8IPA6NC78 632 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 FAM183AA6NL82 134 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 RNASEK-C17orf49H0YIS7 233 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 PSMD11O00231 422 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 GYPCP04921 128 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 PYCR1P32322 319 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 C1QTNF8P60827 252 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 RHOAP61586 193 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 CD164Q04900 197 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 PRDX1Q06830 199 aaKnown RBP1.71□□□□□ -2.14
LRCH3-211ENST00000466054 C10orf91Q5T1B1 145 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 FAM162BQ5T6X4 162 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 ELP2Q6IA86 826 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 FAM183BPQ6ZVS7 135 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 OR10D4PQ8NGN7 298 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 OR2AE1Q8NHA4 323 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 LRRC39Q96DD0 335 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 REEP6Q96HR9 211 aa1.71□□□□□ -2.14
LRCH3-211ENST00000466054 MRPL16Q9NX20 251 aaKnown RBP1.71□□□□□ -2.14
LRCH3-211ENST00000466054 RPUSD1Q9UJJ7 312 aaKnown RBP1.71□□□□□ -2.14
LRCH3-211ENST00000466054 POMPQ9Y244 141 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms