RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 DEFA3P59666 94 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 AP3S2P59780 193 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 ACTBP60709 375 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 ACTG1P63261 375 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 ASAH1Q13510 395 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 RBM39Q14498 530 aaKnown RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 OXA1LQ15070 435 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 TAF9Q16594 264 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 MOGAT2Q3SYC2 334 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 DMRTC1Q5HYR2 192 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 PLAC9Q5JTB6 97 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 TEX36Q5VZQ5 186 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 SP5Q6BEB4 398 aaPredicted RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 C11orf71Q6IPW1 123 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 FIP1L1Q6UN15 594 aaKnown RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 MEX3BQ6ZN04 569 aaKnown RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 HOGA1Q86XE5 327 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 C1orf87Q8N0U7 546 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 GCSAMQ8N6F7 178 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 TMEM229BQ8NBD8 167 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 OR2Z1Q8NG97 314 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 OR11L1Q8NGX0 322 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 OR52I2Q8NH67 350 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 CHPT1Q8WUD6 406 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 ITLN1Q8WWA0 313 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 IGFBPL1Q8WX77 278 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 SLAMF9Q96A28 289 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 NEDD4LQ96PU5 975 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 OR2V2Q96R30 315 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 NICN1Q9BSH3 213 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 TRAF4Q9BUZ4 470 aaPredicted RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 PECRQ9BY49 303 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 RAB1BQ9H0U4 201 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 PRDM13Q9H4Q3 707 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 BANF2Q9H503 90 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 ELL3Q9HB65 397 aaPredicted RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 PLEKHJ1Q9NW61 149 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 RNF7Q9UBF6 113 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 KLK11Q9UBX7 282 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 MRPS7Q9Y2R9 242 aaKnown RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 NPTNQ9Y639 398 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 USP24Q9UPU5 2620 aa4.59□□□□□ -1.68
VPS41-211ENST00000466017 ARFGEF3Q5TH69 2177 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 A6NLC8 198 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 CENPXA8MT69 81 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 MCRIP1C9JLW8 97 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 F8VVB4 439 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 F8VWA3 439 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 H7C1Q1 480 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 J3QKU1 62 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 OVOL3O00110 214 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 GEMIN2O14893 280 aaKnown RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 DEGS1O15121 323 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 DIRAS3O95661 229 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 PTTG1O95997 202 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 NAPSAO96009 420 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 CD74P04233 296 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 CSN2P05814 226 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 CSF1P09603 554 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 IRF2P14316 349 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 PLA2G2AP14555 144 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 GNB3P16520 340 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 PRKACAP17612 351 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 TBPP20226 339 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 GLRA1P23415 457 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 ERP29P30040 261 aaKnown RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 RCVRNP35243 200 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 RAG2P55895 527 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 TAS2R19P59542 299 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 SNRPD2P62316 118 aaKnown RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 SNTB1Q13884 538 aaKnown RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 KLF9Q13886 244 aaPredicted RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 MPPED2Q15777 294 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 GRK1Q15835 563 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 SMIM21Q3B7S5 101 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 TRIQKQ629K1 86 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 OLFML2AQ68BL7 652 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 MZT2BQ6NZ67 158 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 ZNF880Q6PDB4 577 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 Q6YL49 198 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 ZNF554Q86TJ5 538 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 OR8H2Q8N162 312 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 TOMM5Q8N4H5 51 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 OR10AD1Q8NGE0 317 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 OR5D13Q8NGL4 314 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 OR10K1Q8NGX5 313 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 PPP1R35Q8TAP8 253 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 NEUROG1Q92886 237 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 EMG1Q92979 244 aaKnown RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 C14orf79Q96F83 325 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 SDSLQ96GA7 329 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 ARHGAP5-AS1Q96IT6 56 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 SNX22Q96L94 193 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 NKX3-1Q99801 234 aaPredicted RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 FAM234AQ9H0X4 552 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 KCNK15Q9H427 330 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 ABCB10Q9NRK6 738 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 RBFOX1Q9NWB1 397 aaKnown RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 C1orf123Q9NWV4 160 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms