RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 C2orf15Q8WU43 125 aaKnown RBP0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 TMEM239Q8WW34 195 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 RAD51AP1Q96B01 352 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 UBE2WQ96B02 151 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 TMIGD2Q96BF3 282 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 IGF2BP2-AS1Q96M15 143 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 TRIB3Q96RU7 358 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 HBEGFQ99075 208 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 LINC01587Q99440 93 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 PITX2Q99697 317 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 SIKE1Q9BRV8 207 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 BEX2Q9BXY8 128 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 TMBIM4Q9HC24 238 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 MRM2Q9UI43 246 aaKnown RBP0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 MCTS1Q9ULC4 181 aaKnown RBP0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 DYSFO75923 2080 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 USP42Q9H9J4 1324 aaKnown RBP0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 KIAA0232Q92628 1395 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 RAB3GAP2Q9H2M9 1393 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 CACNA1DQ01668 2161 aa0.8□□□□□ -2.28
NUCKS1-202ENST00000464938 MIA3Q5JRA6 1907 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 FBN1P35555 2871 aaKnown RBP0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 IGHV1-45A0A0A0MS14 117 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 A0A0B4J2C4 111 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 A0A1B0GW15 77 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 A0A1B0GX12 115 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 RAB19A4D1S5 217 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 OR5H14A6NHG9 310 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 C8orf87E5RJ46 101 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 RNASEK-C17orf49H0YIS7 233 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 UBDO15205 165 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 RGS5O15539 181 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 CRXO43186 299 aaPredicted RBP0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 SGCEO43556 437 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 SYNGR2O43760 224 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 CDS2O95674 445 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 GIMD1P0DJR0 217 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 SCGB1C2P0DMR2 95 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 PRPS1L1P21108 318 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 RPA3P35244 121 aaPredicted RBP0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 RANBP1P43487 201 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF83P51522 516 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 HADHBP55084 474 aaKnown RBP0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 OR10A3P58181 314 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 KRTAP12-3P60328 96 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 HBG1P69891 147 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 HBG2P69892 147 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 TRAM1Q15629 374 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 GOLGA7BQ2TAP0 167 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 PYDC2Q56P42 97 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 TTMPQ5BVD1 217 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 FBXO48Q5FWF7 155 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 SPNS3Q6ZMD2 512 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 SSX6Q7RTT6 188 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 LYZL2Q7Z4W2 148 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 MRPL52Q86TS9 123 aaKnown RBP0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 LRP11Q86VZ4 500 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF738Q8NE65 137 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 OR8G5Q8NG78 346 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 SCGB1C1Q8TD33 95 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 OR5P3Q8WZ94 311 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 RORBQ92753 470 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 CMBLQ96DG6 245 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 ZMYND19Q96E35 227 aaPredicted RBP0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 SLC25A44Q96H78 314 aaPredicted RBP0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 EBPLQ9BY08 206 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 GABARAPL1Q9H0R8 117 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 GOLPH3Q9H4A6 298 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 HAUS4Q9H6D7 363 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 OR5V1Q9UGF6 321 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 SNX24Q9Y343 169 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 LINC00588Q9Y4M8 146 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 TBL2Q9Y4P3 447 aaKnown RBP0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 LTBP2Q14767 1821 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 PTPRKQ15262 1439 aa0.79□□□□□ -2.28
NUCKS1-202ENST00000464938 FBN3Q75N90 2809 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 TRBV24-1A0A075B6N3 115 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 IGHV3OR15-7A0A075B7D8 119 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 A0A1B0GTI1 187 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 FAM25EA8MYX2 175 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 ZNF879B4DU55 563 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 E7EQL1 145 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 C3orf84H3BNL1 204 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 H3BP45 60 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 LECT2O14960 151 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 PSCAO43653 123 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 ENSAO43768 121 aaKnown RBP0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 GPR75O95800 540 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 FADS2O95864 444 aaKnown RBP0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 EPPINO95925 133 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 APOA1P02647 267 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 PSKH1P11801 424 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 MLNP12872 115 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 EVI2BP34910 448 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 UGT2B10P36537 528 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 COILP38432 576 aaPredicted RBP0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 INPP1P49441 399 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 GZMMP51124 257 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 AQP5P55064 265 aa0.78□□□□□ -2.28
NUCKS1-202ENST00000464938 RHOAP61586 193 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms