RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 DPCDQ9BVM2 203 aaPredicted RBP9.59□□□□□ -0.87
TRAF3IP1-204ENST00000462122 BARHL1Q9BZE3 327 aa9.59□□□□□ -0.87
TRAF3IP1-204ENST00000462122 UNKLQ9H9P5 680 aaKnown RBP9.59□□□□□ -0.87
TRAF3IP1-204ENST00000462122 RCC2Q9P258 522 aaKnown RBP9.59□□□□□ -0.87
TRAF3IP1-204ENST00000462122 FBLN5Q9UBX5 448 aa9.59□□□□□ -0.87
TRAF3IP1-204ENST00000462122 NUP50Q9UKX7 468 aa9.59□□□□□ -0.87
TRAF3IP1-204ENST00000462122 TRGV10A0A0A0MS01 117 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ODAMA1E959 279 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 HSPB6O14558 160 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 GLAP06280 429 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 EPHA1P21709 976 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 SDC2P34741 201 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 AESQ08117 197 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 UNC119Q13432 240 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 RBM39Q14498 530 aaKnown RBP9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 FAM189A2Q15884 450 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 KLF17Q5JT82 389 aaPredicted RBP9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 HES5Q5TA89 166 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 NCR3LG1Q68D85 454 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 OR10K2Q6IF99 312 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 METAP1DQ6UB28 335 aaPredicted RBP9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 Q8N7P7 452 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TPRX1Q8N7U7 411 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 OR51D1Q8NGF3 324 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 COQ2Q96H96 371 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ZNF714Q96N38 554 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 URM1Q9BTM9 101 aaKnown RBP9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 FUNDC2Q9BWH2 189 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TM2D1Q9BX74 207 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 NCOR1P1Q9H4R4 102 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 OR6C3Q9NZP0 311 aa9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 UBE2J1Q9Y385 318 aaPredicted RBP9.58□□□□□ -0.88
TRAF3IP1-204ENST00000462122 C17orf98A8MV24 154 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 MCRIP1C9JLW8 97 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 LDLRAD4O15165 306 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TMEM127O75204 238 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 PDCD6O75340 191 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 CA11O75493 328 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 IFNA2P01563 188 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TFAP2AP05549 437 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ZNF728P0DKX0 622 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 CCL3L1P16619 93 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 FUT3P21217 361 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 PRTN3P24158 256 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 FPR2P25090 351 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 GLIPR1P48060 266 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 CLDN12P56749 244 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ERVFRD-1P60508 538 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 GUCA2AQ02747 115 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 C2orf76Q3KRA6 126 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 RSBN1Q5VWQ0 802 aaPredicted RBP9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 SLC35E4Q6ICL7 350 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 RAB12Q6IQ22 244 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 SFXN4Q6P4A7 337 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 C9orf139Q6ZV77 190 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TCF23Q7RTU1 214 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TRAPPC6BQ86SZ2 158 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 NR2C2APQ86WQ0 139 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 BPIFB2Q8N4F0 458 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 NEK7Q8TDX7 302 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 CORO2AQ92828 525 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 GAL3ST2Q9H3Q3 398 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 KCNK15Q9H427 330 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 RNF167Q9H6Y7 350 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 LIN7BQ9HAP6 207 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 SIRT7Q9NRC8 400 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TAS2R3Q9NYW6 316 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ZNF581Q9P0T4 197 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 PEX16Q9Y5Y5 336 aa9.57□□□□□ -0.88
TRAF3IP1-204ENST00000462122 C2CD3Q4AC94 2353 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 MEIKINA0A087WXM9 373 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 CENPVL3A0A0U1RRI6 287 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TMEM30CPA0ZSE6 113 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 IGHV4-38-2P0DP08 117 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 RAB6AP20340 208 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ALDH3B2P48448 385 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 DLX6P56179 175 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 GPR141Q7Z602 305 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 CROCCP3Q8IVE0 287 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 C11orf42Q8N5U0 333 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ZNF565Q8N9K5 539 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 PLPPR1Q8TBJ4 325 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TNFRSF14Q92956 283 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 LHX4Q969G2 390 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 PTX4Q96A99 478 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 NEDD4LQ96PU5 975 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 MS4A7Q9GZW8 240 aaPredicted RBP9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 LPAR5Q9H1C0 372 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 HEXA-AS1Q9H8Q6 139 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ETAA1Q9NY74 926 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 DAPK2Q9UIK4 370 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 KIF25Q9UIL4 384 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 RAB22AQ9UL26 194 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 JMJD1CQ15652 2540 aa9.56□□□□□ -0.88
TRAF3IP1-204ENST00000462122 IGHV1-69DA0A0B4J2H0 117 aa9.55□□□□□ -0.88
TRAF3IP1-204ENST00000462122 TMEM272A0A1B0GTI8 110 aa9.55□□□□□ -0.88
TRAF3IP1-204ENST00000462122 SMIM30A4D0T7 59 aa9.55□□□□□ -0.88
TRAF3IP1-204ENST00000462122 ZNF729A6NN14 1252 aaPredicted RBP9.55□□□□□ -0.88
TRAF3IP1-204ENST00000462122 CLPXO76031 633 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms