RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 K7N7A8 449 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 SIRPB1O00241 398 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 DVL1O14640 695 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 MGST3O14880 152 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 SIGLEC5O15389 551 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 OR2H2O95918 312 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 IGKV1D-12P01611 117 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 IGHV2-5P01817 119 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 APOA1P02647 267 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 TK1P04183 234 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 CLEC2LP0C7M8 214 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 SLC2A2P11168 524 aaPredicted RBP4.94□□□□□ -1.62
NUP98-208ENST00000461047 EGR1P18146 543 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 GATA3P23771 443 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 LMO1P25800 156 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 DUSP1P28562 367 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 BLVRBP30043 206 aaPredicted RBP4.94□□□□□ -1.62
NUP98-208ENST00000461047 MNDAP41218 407 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 VEGFCP49767 419 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 CAV3P56539 151 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 CLDN12P56749 244 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 PITPNAQ00169 270 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 COL10A1Q03692 680 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 MEF2CQ06413 473 aaPredicted RBP4.94□□□□□ -1.62
NUP98-208ENST00000461047 GRK1Q15835 563 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 TMEM177Q53S58 311 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 UBE2NLQ5JXB2 153 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 FAM201AQ5SY85 155 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 TMEM200BQ69YZ2 307 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 TRAT1Q6PIZ9 186 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 SPNS3Q6ZMD2 512 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 ZNF788Q6ZQV5 615 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 Q6ZTK2 550 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 LYPD6Q86Y78 171 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 TGIF2LYQ8IUE0 185 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 SAMD12Q8N8I0 201 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 CLDND2Q8NHS1 167 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 MCFD2Q8NI22 146 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 ST8SIA4Q92187 359 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 H1FXQ92522 213 aaKnown RBP4.94□□□□□ -1.62
NUP98-208ENST00000461047 RAB3CQ96E17 227 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 NUDT16L1Q9BRJ7 211 aaKnown RBP4.94□□□□□ -1.62
NUP98-208ENST00000461047 DPCDQ9BVM2 203 aaPredicted RBP4.94□□□□□ -1.62
NUP98-208ENST00000461047 TM2D1Q9BX74 207 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 NAA50Q9GZZ1 169 aaKnown RBP4.94□□□□□ -1.62
NUP98-208ENST00000461047 MMP27Q9H306 513 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 BANF2Q9H503 90 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 RNF167Q9H6Y7 350 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 KCNIP1Q9NZI2 227 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 OR6C3Q9NZP0 311 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 CCDC59Q9P031 241 aaKnown RBP4.94□□□□□ -1.62
NUP98-208ENST00000461047 COMMD3Q9UBI1 195 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 HSF4Q9ULV5 492 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 MGAT4AQ9UM21 535 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 PEX16Q9Y5Y5 336 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 ABCA4P78363 2273 aa4.94□□□□□ -1.62
NUP98-208ENST00000461047 A0A075B6Q4 140 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 IGKV1D-17A0A075B6S4 117 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 TRGV10A0A0A0MS01 117 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 A0A0G2JK05 382 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 TMEM272A0A1B0GTI8 110 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 A0A1W2PQ09 198 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 TMEM30CPA0ZSE6 113 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 SERPINE3A8MV23 424 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 F8VVB4 439 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 F8VWA3 439 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.93□□□□□ -1.62
NUP98-208ENST00000461047 GEMIN2O14893 280 aaKnown RBP4.93□□□□□ -1.62
NUP98-208ENST00000461047 ENSAO43768 121 aaKnown RBP4.93□□□□□ -1.62
NUP98-208ENST00000461047 PDCD6O75340 191 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 CLPXO76031 633 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 TPPPO94811 219 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 TGFAP01135 160 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 SLPIP03973 132 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 CSN2P05814 226 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 CD3GP09693 182 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 CD99P14209 185 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 GZMHP20718 246 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 ERP29P30040 261 aaKnown RBP4.93□□□□□ -1.62
NUP98-208ENST00000461047 EDDM3BP56851 147 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 LMO4P61968 165 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 SCGB2A2Q13296 93 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 ARFRP1Q13795 201 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 SPCS2Q15005 226 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 PIGYQ3MUY2 71 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 KRBOX4Q5JUW0 171 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 PRR14LQ5THK1 2151 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 WDR25Q64LD2 544 aaPredicted RBP4.93□□□□□ -1.62
NUP98-208ENST00000461047 OR10K2Q6IF99 312 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 LYPD2Q6UXB3 125 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 BAIAP2L2Q6UXY1 529 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 TRAPPC6BQ86SZ2 158 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 GLCCI1Q86VQ1 547 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 OR8H2Q8N162 312 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 BATF2Q8N1L9 274 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 FAM89BQ8N5H3 189 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 CD177Q8N6Q3 437 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 SUMF2Q8NBJ7 301 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 ZNRF1Q8ND25 227 aa4.93□□□□□ -1.62
NUP98-208ENST00000461047 TMEM104Q8NE00 496 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms