RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CSPG4Q6UVK1 2322 aa9.33□□□□□ -0.92
APTX-209ENST00000460940 MED13LQ71F56 2210 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 RAB19A4D1S5 217 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 OR4C45A6NMZ5 311 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 UBE2CO00762 179 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 SPP1P10451 314 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 GUCA2BQ16661 112 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 ODF4Q2M2E3 257 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 CEACAM21Q3KPI0 293 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 PRAMEF6Q5VXH4 476 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 TMEM42Q69YG0 159 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 RPL22L1Q6P5R6 122 aaKnown RBP9.32□□□□□ -0.92
APTX-209ENST00000460940 GLDNQ6ZMI3 551 aaPredicted RBP9.32□□□□□ -0.92
APTX-209ENST00000460940 Q6ZTK2 550 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 LDLRAD3Q86YD5 345 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 SPAG16Q8N0X2 631 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 ZNF676Q8N7Q3 588 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 HPSE2Q8WWQ2 592 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 COMMD4Q9H0A8 199 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 TLNRD1Q9H1K6 362 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 GPN1Q9HCN4 374 aaPredicted RBP9.32□□□□□ -0.92
APTX-209ENST00000460940 RASL12Q9NYN1 266 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 TREM2Q9NZC2 230 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 HHLA2Q9UM44 414 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 LOC100289279A0A1B0GTE1 492 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 DISC1C4P0D8 188 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 GATBO75879 557 aaKnown RBP9.32□□□□□ -0.92
APTX-209ENST00000460940 SIX6O95475 246 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 NRASP01111 189 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 RPA2P15927 270 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 MDH2P40926 338 aaKnown RBP9.32□□□□□ -0.92
APTX-209ENST00000460940 TAS2R43P59537 309 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 GNG3P63215 75 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 CDK5R1Q15078 307 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 RNF212Q495C1 297 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 TMEM155Q4W5P6 130 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 C10orf91Q5T1B1 145 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 PLCXD3Q63HM9 321 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 ZNF626Q68DY1 528 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 MOB3CQ70IA8 216 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 MUC20Q8N307 709 aaPredicted RBP9.32□□□□□ -0.92
APTX-209ENST00000460940 MAPK1IP1LQ8NDC0 245 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 OR5A2Q8NGI9 324 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 RPS4Y2Q8TD47 263 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 PP6455Q8WZ26 134 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 RAB39BQ96DA2 213 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 TSNAXQ99598 290 aaKnown RBP9.32□□□□□ -0.92
APTX-209ENST00000460940 TMED9Q9BVK6 235 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 CHIAQ9BZP6 476 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 CHST5Q9GZS9 411 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 ARL6Q9H0F7 186 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 ZFP57Q9NU63 452 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 RNF7Q9UBF6 113 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 CARHSP1Q9Y2V2 147 aaKnown RBP9.32□□□□□ -0.92
APTX-209ENST00000460940 CBY1Q9Y3M2 126 aa9.32□□□□□ -0.92
APTX-209ENST00000460940 NSD1Q96L73 2696 aaPredicted RBP9.31□□□□□ -0.92
APTX-209ENST00000460940 TRBV2A0A0J9YWF9 115 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 IGHV3-64DA0A0J9YX35 117 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 LRP5LA4QPB2 252 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 ANKRD61A6NGH8 418 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 A6NLC8 198 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 ZNF729A6NN14 1252 aaPredicted RBP9.31□□□□□ -0.92
APTX-209ENST00000460940 E9PI62 339 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 MT-ND4P03905 459 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 GRPP07492 148 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 CPT2P23786 658 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 PAX6P26367 422 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 PMELP40967 661 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 POU3F4P49335 361 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 ZNF154Q13106 437 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 MPPED2Q15777 294 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 FAM76BQ5HYJ3 339 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 LIN54Q6MZP7 749 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 CLEC9AQ6UXN8 241 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 WDR86Q86TI4 376 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 NR2C2APQ86WQ0 139 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 PUSL1Q8N0Z8 303 aaKnown RBP9.31□□□□□ -0.92
APTX-209ENST00000460940 OR5AK2Q8NH90 309 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 CLDND2Q8NHS1 167 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 C1orf159Q96HA4 380 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 UFSP2Q9NUQ7 469 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 C1orf123Q9NWV4 160 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 TAS2R3Q9NYW6 316 aa9.31□□□□□ -0.92
APTX-209ENST00000460940 CR1P17927 2039 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 CREBL2O60519 120 aaPredicted RBP9.3□□□□□ -0.92
APTX-209ENST00000460940 ZFPL1O95159 310 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 CYB5R3P00387 301 aaPredicted RBP9.3□□□□□ -0.92
APTX-209ENST00000460940 CD3GP09693 182 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 ZNF20P17024 532 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 CFHR2P36980 270 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 KCNJ3P48549 501 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 RAB5BP61020 215 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 DGCR2P98153 550 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 TRAM1Q15629 374 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 TMEM95Q3KNT9 176 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 SFXN4Q6P4A7 337 aa9.3□□□□□ -0.92
APTX-209ENST00000460940 SLC16A13Q7RTY0 426 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms